Gene Tmz1t_3835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3835 
Symbol 
ID7874077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp4228320 
End bp4229234 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content71% 
IMG OID643700777 
Producttyrosine recombinase XerC 
Protein accessionYP_002890801 
Protein GI237654487 
COG category[L] Replication, recombination and repair 
COG ID[COG4973] Site-specific recombinase XerC 
TIGRFAM ID[TIGR02224] tyrosine recombinase XerC 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.955587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCCCGC GGCGGTCCGC CGAGGCGCCG GCCGCGCTGC CCGAGCGCAT GCAGGCCTGG 
CTGGCCTGGC TCGCCACCCA GCGCCGGGTC TCGCCGCTGA CGCTGACCGC CTACCGCGCC
GGCCTGCAGG CCTTGCTGCG CCTCGCCGAG GAGCACCCGC CCGAATCCTT GCAGCCCGCC
GACATCCGCC GCTTCGTCGC CCGCCTGCAT GGCGAGGGCC AGCAGGGGCG CTCGATCGCC
CGCCATCTGT CGGCGTGGCG AGGCTTCTAC CGCTGGTTGG TGCGCGAGCA CGGCGTGCGC
ATCAATCCGG CGCTCGGCAT CCGTCCGCCC AAGTCCCCCT CGACGCTGCC GCGCGTGCTC
TCGCCCGAGC AGGCGAACGC GCTGCTCGAT CCAGAGCCGC AGAATTTGCT AGAAATTCGG
GATATTGCGA TGTTCGAGCT TTTTTATTCT TCCGGTCTGC GAGTTGCGGA ACTCGCCGGA
CTCGACATCG ATTCCGGGCT GGACCTCGCC GAGGGCCTGG TCACGGTCAC CGGCAAGCGC
CAGCGCCAGC GCACCGTGCC GGTGGGCGGC AAGGCGATCG CGGCCCTGCG CCCCTGGCTG
GAGATCCGCG CCGGCCTCGC TGCGGCGGGC GAGCGCGCGC TGTTCGTGAC CCGCGACGGC
CACCGCCTGA GCACCCGCGG CATCGCCAGC CGGCTGGGCA CGCGCGCTCA GGCGCTCGGG
CTCGGCGTGC ATGTGCATCC GCACATGCTG CGGCACAGTT TTGCGAGTCA TCTTCTGCAA
TCGAGCGGCG ATCTTCGCGC TGTCCAGGAA CTGCTCGGCC ACGCCAGCAT CCGCAGCACG
CAGATCTACA CGCATCTCGA TTTCCAGCAT CTAGCCGCGG TGTACGACGC GGCACATCCG
CGCGCGCGCA AGTAG
 
Protein sequence
MGPRRSAEAP AALPERMQAW LAWLATQRRV SPLTLTAYRA GLQALLRLAE EHPPESLQPA 
DIRRFVARLH GEGQQGRSIA RHLSAWRGFY RWLVREHGVR INPALGIRPP KSPSTLPRVL
SPEQANALLD PEPQNLLEIR DIAMFELFYS SGLRVAELAG LDIDSGLDLA EGLVTVTGKR
QRQRTVPVGG KAIAALRPWL EIRAGLAAAG ERALFVTRDG HRLSTRGIAS RLGTRAQALG
LGVHVHPHML RHSFASHLLQ SSGDLRAVQE LLGHASIRST QIYTHLDFQH LAAVYDAAHP
RARK