Gene Tmz1t_3832 details

Gene Information

• Locus tag: Tmz1t_3832
• Symbol: ruvB
• ID: 7874074
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 4226051
• End bp: 4227106
• Gene Length: 1056 bp
• Protein Length: 351 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 643700774
• Product: Holliday junction DNA helicase RuvB
• Protein accession: YP_002890798
• Protein GI: 237654484
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2255] Holliday junction resolvasome, helicase subunit
• TIGRFAM ID: [TIGR00635] Holliday junction DNA helicase, RuvB subunit

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGAAA CCGACAAGCT CAAGGCTGCC GCCCCCGCCG AGCGCCTGAT CTCCGCCGCC 
CCCGCCGACC GCCAGGAAGA CGCGATCGAG CGCGCGCTGC GTCCCAAGCG CCTGGCCGAG 
TACGTCGGCC AGGTGAAGAT CCGCGAACAG TTGGAGATCT TCATCCAGGC GGCGCGCAAT 
CGCAGCGAGG CGCTCGACCA CGTGCTGCTG TTCGGCCCGC CCGGGCTGGG CAAGACCACG 
CTCGCCCACA TCGTCGCCGC CGAGATGGGC GTGAACATGC GCCAGACCTC CGGCCCGGTG 
CTCGAGCGCG CCGGCGACCT CGCCGCGCTG CTCACCAACC TCGAACCGCA CGACGTGCTC 
TTCATCGACG AGATCCACCG CCTGTCGCCG GTGGTCGAGG AGATCCTCTA CCCGGCGCTG 
GAGGACTTCC AGATCGACAT CATGATCGGC GAAGGCCCGG CGGCACGCTC GGTGAAGCTC 
GACCTGCCGC CCTTCACGCT GGTCGGCGCC ACCACCCGCG CCGGCATGCT CACCAACCCG 
CTGCGCGACC GCTTCGGCAT CGTGTCACGG CTGGAGTTCT ACACCGCGGA CGAGCTCGCC 
TTCATCGTCG GACGCTCGGC GCGCCTGCTC AATGTGGAAA TCGAGGACAA CGGCGCGCTC 
GAGATCGCCC GCCGCGCGCG CGGCACGCCG CGCATCGCCA ACCGCCTGCT GCGCCGGGTG 
CGCGACTACG CCGAGGTGAA GGCGGGTGGC CGCATCACCG CCGCGGTCGC GGACGCGGCG 
CTGCGCATGC TGGACGTCGA CAACCTGGGC CTCGACCTGA TGGACCGCAA GCTGCTGTCG 
GCGATGCTGG AGAAATTCGG CGGCGGCCCG GTCGGCCTGG ACAACATCGC CGCGGCGATC 
GGCGAATCGA CCGACACCAT CGAGGACGTC ATCGAGCCCT ACCTGATCCA GCAGGGCTAC 
CTGCAGCGCA CCCCGCGCGG GCGCATGGCG ACGCAGTCGA TCTGGCAGCA CTTCGGCCTC 
GTGCCGCCGC GCATCGGCGG CGACCTCTTC CAGTAG 

 

Protein sequence

MIETDKLKAA APAERLISAA PADRQEDAIE RALRPKRLAE YVGQVKIREQ LEIFIQAARN 
RSEALDHVLL FGPPGLGKTT LAHIVAAEMG VNMRQTSGPV LERAGDLAAL LTNLEPHDVL 
FIDEIHRLSP VVEEILYPAL EDFQIDIMIG EGPAARSVKL DLPPFTLVGA TTRAGMLTNP 
LRDRFGIVSR LEFYTADELA FIVGRSARLL NVEIEDNGAL EIARRARGTP RIANRLLRRV 
RDYAEVKAGG RITAAVADAA LRMLDVDNLG LDLMDRKLLS AMLEKFGGGP VGLDNIAAAI 
GESTDTIEDV IEPYLIQQGY LQRTPRGRMA TQSIWQHFGL VPPRIGGDLF Q