Gene Tmz1t_3822 details

Gene Information

• Locus tag: Tmz1t_3822
• ID: 7874064
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 4216592
• End bp: 4217062
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 643700764
• Product: rRNA large subunit methyltransferase
• Protein accession: YP_002890788
• Protein GI: 237654474
• COG category: [S] Function unknown
• COG ID: [COG1576] Uncharacterized conserved protein
• TIGRFAM ID: [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTGA TCATCGTCGC CGTCGGCCAC CGCATGCCCG CCTGGGTGCA GGCCGGCTTC 
GACGAGTTCG CCCGCCGCAT GCCGCGCGAG CTGCAGTTGC AGCTCGTCGA GGTCAAGGCC 
GAGCCGCGCA GCGGCGGCAA GACGGTGGAG GCGATGATGG CGGCCGAGGC CGCGCGCATC 
GAGGCCACCC TGCCGCCGCG CTGCCGCCGC GTGATCCTCG ACGAGCGCGG CGCCGACCTG 
AGCACGCTGG CGCTCGCGCG CCGGCTGGAG TCCTGGCAGG GCGCAGGCGA CGACGTCGCG 
CTCATCGTCG GCGGCCCCGA CGGCCTCGCC CCAGCGTTCA AGGCGGGCGC CCACGAGGCC 
ATCCGCCTCT CCAGCCTCAC CCTCCCCCAC GCCTTGGTGC GCCCCCTGCT CGCCGAGGCG 
CTCTACCGCG CGTGGACGGT GCTCAAGAAC CACCCCTACC ACCGCGAGTA G 

 

Protein sequence

MKLIIVAVGH RMPAWVQAGF DEFARRMPRE LQLQLVEVKA EPRSGGKTVE AMMAAEAARI 
EATLPPRCRR VILDERGADL STLALARRLE SWQGAGDDVA LIVGGPDGLA PAFKAGAHEA 
IRLSSLTLPH ALVRPLLAEA LYRAWTVLKN HPYHRE