| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3816 |
|---|
| Symbol | |
|---|
| ID | 7874058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 4211995 |
|---|
| End bp | 4212561 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643700758 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002890782 |
|---|
| Protein GI | 237654468 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3663] G:T/U mismatch-specific DNA glycosylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.206129 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACGA CCGCCGCACC GCTGGTGCGC AGCTTTGCCC CGCTGTTCCG CGCCGACGCG
CGCGTGCTGG TGCTCGGTAG CATGCCCGGC ACGGCCTCGC TCGCCGCCGC GCAGTATTAC
GCGCATCCGC GCAACGCCTT CTGGCCGATC ATGGGCGCGC TCTTCGGCGC CGGAGCGGAA
CTCCCCTACG CGCAGCGGCT CGAGCGCCTC GCCGCCGCCG GCGTCGCGCT GTGGGACGTC
ATCGGCCGCT GCGAGCGCGC CGGCAGCCTC GACAGCGCGA TCGCGCCCGA CAGCATCGAG
GCCAACGACT TCGCCGGCCT CTTCGCCGCC TGCCCCGACA TCGGCCACGT CTTCTTCAAC
GGCACCGCCG CCGAGACCGC CTTCCGCCGC CATGTGCGCG GCCGCATCGC GCTGCCGCCG
CTGCACTTCA CCCGCCTGCC CTCGACCAGC CCGGCGCACG CCGCGCGCGG GCTGGAGGCC
AAGCTCGCCG CCTGGCAGGT CGTGAAGGCG GCAGCGCACC GCGCGGCCGC AGCCCGCATC
GACATCCCGG CCGCCCAGGC CGCCTGA
|
|---|
| Protein sequence | MSTTAAPLVR SFAPLFRADA RVLVLGSMPG TASLAAAQYY AHPRNAFWPI MGALFGAGAE
LPYAQRLERL AAAGVALWDV IGRCERAGSL DSAIAPDSIE ANDFAGLFAA CPDIGHVFFN
GTAAETAFRR HVRGRIALPP LHFTRLPSTS PAHAARGLEA KLAAWQVVKA AAHRAAAARI
DIPAAQAA
|
|---|
| |