Gene Tmz1t_3760 details

Gene Information

• Locus tag: Tmz1t_3760
• Symbol: cobT
• ID: 7873757
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 4130345
• End bp: 4131406
• Gene Length: 1062 bp
• Protein Length: 353 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 643700704
• Product: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
• Protein accession: YP_002890728
• Protein GI: 237654414
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG2038] NaMN:DMB phosphoribosyltransferase
• TIGRFAM ID: [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCCCT ACGCCATCGC CTCGCCCGAC CCGCTGCTCT CCGCCGCGAT CCAGCACAAG 
ATCGACCGCA AGACCAAGCC GCGCGGCGCG CTCGGCCGCC TGGAGGCGCT CGCGCACCAG 
ATCGCGCTGC TGCAGCAGAC CCTGGAACCC GAACTGCGCC AGCCGCACAT CGTCGTCTTC 
GCCGGCGACC ACGGCGCGGC GCGTGCCGGC GTGTCCGCCT ACCCGCAGGA CGTGACCTGG 
CAGATGGTGG AGAACTTCCT CGCCGGCGGC GCGGCGATCA ACGTATTCAC CCGCCAGCTC 
GGGCTGGATC TCACCGTGGT CGATGCCGGC GTCAACCACG ACTTCGGCAA GCGCCCGGGG 
CTGATCGACG CCAAGATCGC GCCCGGCACG GCCAACTACA TCGAAGAGCC GGCCATGAGC 
GCCGCGCAGC GCGACGCAGC GCTCGAGCGC GGGCGCGGCG TCGCCCATGC GCTCGCCGAC 
AACGGCTGCA ACTGCATCGG CTTGGGCGAG ATGGGTATCG GCAACACCGC GTCGGCCTCG 
CTGCTCACCC ACTGTCTGGT GGGCGCCGAG CACGACGCCG AGCTCTATAC CGTCACCGGC 
CGCGGCACCG GCCTGGACGA CCCCGGCCTG TTCCGCAAGC GCAGCATGCT CGCCCAGGCG 
CTGCAGCGCG GTGGTCGACC ACACGACCCG CTGGAGGTGC TGGTGCAGTA TGGCGGCCTC 
GAGATCGCCA TGATGGCGGG CGCCATCCTC GGCGCCGCCG AGCGCCGCAT GCTGGTGCTG 
GTCGACGGCT TCATCGTCAC CTCGGCCGTG CTCGTCGCCC ACGCCCTGGC ACCCGCGGTG 
CTGTCGTGCT GCGTCTTCGC GCATCGCTCG CAGGAGCCCG GCCACCGCGT GCAGCTCGAC 
TTCCTGCAGG CCGAACCGCT GATGGAGCTC GACCTCCGCC TGGGCGAAGG CACCGGCGCG 
GCACTCGCCT TCCCGCTCGT GCAGGCGGCT GTGAATTTCA TCAACGAGAT GGCGAGCTTC 
GAGTCCGCCG GGGTCAGCGA CCAGGGCCGC AGCCCGGGCT GA 

 

Protein sequence

MKPYAIASPD PLLSAAIQHK IDRKTKPRGA LGRLEALAHQ IALLQQTLEP ELRQPHIVVF 
AGDHGAARAG VSAYPQDVTW QMVENFLAGG AAINVFTRQL GLDLTVVDAG VNHDFGKRPG 
LIDAKIAPGT ANYIEEPAMS AAQRDAALER GRGVAHALAD NGCNCIGLGE MGIGNTASAS 
LLTHCLVGAE HDAELYTVTG RGTGLDDPGL FRKRSMLAQA LQRGGRPHDP LEVLVQYGGL 
EIAMMAGAIL GAAERRMLVL VDGFIVTSAV LVAHALAPAV LSCCVFAHRS QEPGHRVQLD 
FLQAEPLMEL DLRLGEGTGA ALAFPLVQAA VNFINEMASF ESAGVSDQGR SPG