Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_3757 |
Symbol | |
ID | 7873754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 4126833 |
End bp | 4128671 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643700701 |
Product | TonB-dependent receptor plug |
Protein accession | YP_002890725 |
Protein GI | 237654411 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4206] Outer membrane cobalamin receptor protein |
TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATCC GTGTTTCCGC GCTCGCCTCG GCATGCGCGC TCGCCTGTTT CCTCGCACCG GCCGCTCATG CGGCCGATGC CCAGCTCGGC CACGTCGTCG TGACCGCCAC TCGCCAGCCG ATCAGTGCCG ATGCGGCCCT GGCCAGCGTG GATGTCATCG AGCGCGACGA AATCGCCCGC GCGGGGCATT CGAGCCTGCT GGGCCTGCTC TCCTCGCGGC CGGGCGTGCA GATGGCACGC AATGGCGGTC CTGGTTCGAG CGGCAGCATC TTCATCCGCG GGGCGAACTC CGGACACACG CTGGTGCTGG TCGATGGGGT GCGCATGGGC TCCGCCACCA GCGGCTCTCC GGTGCTGGAG ACGATCCCGC TCGAACTCAT CGAGCGTATC GAGATCCTGC GCGGCCCCGG AAGTGCGCTG TACGGCGCGG ATGCGCTCGG TGGCGTGATC CAGGTGTTCA CCCGCAAGGG GCGCGAGGGC TTCCAGCCCT CCGTGCGCGT CGGGGCCGGC ACGGACGGCG CGCGCGAGGC GAGCGCCACG CTCGCGGGTG GAAACGAGCG TCTGCGCTAC AGCCTGACCG CCGGTCACGA GCGCAGCGAC GGCTTCAACG CAAGGCCGAA TTCGGCGACC GCCGCGGATG CCGACGACGA CGGCTTCCGC GAGGATTATC TGGGCGCGTC GCTGGTGCTG GACCTGGGCG GCAATGACGA GCTCGGCGCC AACCTGCTGT ATTCCGACAT GCGCAACTGG TACGACGCGG CACAGCCTTT CGACTCCTAC CTCGACAAGC GTGCCGAGAC CTTCGGCGCG TATCTGCGCA AGCAGCATTC CGCCGACTGG GCCAGCACCC TGCGCTTCGG TCACGGGGTG GATGCCCTCG ACAACCAGTC GAACGCGAGC ACGCGTTCCC GCTTCGATAC CACGCAGCGC CAGTTGAGCT GGCAGCACGA CGTCGCCGTA GGTGGCGGCT CGCTGATGGC GGCGTACGAG TTTCTGCAGC AGCGCGTGAA GACCACCTCC GACTTCGAGA AGACGCGTCG CCACATCAAC GCCTTCCTGC TCGGCTGGGG TGGTGAATTC GACCGCCACA ACGTCCAGCT CAATGCGCGC CACGACCGCA ACTCGCAGTT CGGTGGCAAG ACCACCGGCG CCGCGGCCTA CGGCTATCGG CTTGCGCCCG AGTGGCGCGC CCATGCCAGC ATCGGCACGG CGTTCAAGGC GCCGACCTTC AACGATCTGT ACTTCCCGGT GGAGTGCTAC GGTGCCTGGG GCTGCTTCGG CGGCAATCCG GACCTGGAGC CCGAGGAGGC GCTCAACCGT GAGCTGGGCG TGGCCTGGGA GCGCAACGGG GTCGGTGTCG ACCTGACCTA TTTCAACAAC CGCATCAAGA ACCTCATCGA CTGGAGCACC GGCATCGCCT CCAATGTGGG CAGGGCCGAC ATCCAGGGGA TCGAGGCGGC GCTGTCCGCG ACCCTGGGCG ACTACCGGCT GCGCGCCAGC GTCGACCTGC TCGACGCGGA GGATGACGAG ACCGGCGATC AGCTCGGCCG CCGCGCGCGC GTCGGCGGGG CGCTCGCGCT GGAGCGTGCG GTGGGCGCGT GGACCTGGGG TGTGGAGTGG AACGGCAAGG GGCGGCGCTA TGATCAGGTG CCGAACGCGG TGTCCAATCG CCTCGGCGGC TACGGTCTGG TCGATGCCTA CGCGCACTAC GCCGTGGCGC GCGACTGGAG CGTCGAAGTT CGTGCCAACA ATCTACTCGA CAAGGACCAT GAGCTTGCGA AGGGGTTCGC AACACAGGGC AGGAGTGCCT TCGTCGCGCT GCGCTACGCG ATGCACTGA
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Protein sequence | MKIRVSALAS ACALACFLAP AAHAADAQLG HVVVTATRQP ISADAALASV DVIERDEIAR AGHSSLLGLL SSRPGVQMAR NGGPGSSGSI FIRGANSGHT LVLVDGVRMG SATSGSPVLE TIPLELIERI EILRGPGSAL YGADALGGVI QVFTRKGREG FQPSVRVGAG TDGAREASAT LAGGNERLRY SLTAGHERSD GFNARPNSAT AADADDDGFR EDYLGASLVL DLGGNDELGA NLLYSDMRNW YDAAQPFDSY LDKRAETFGA YLRKQHSADW ASTLRFGHGV DALDNQSNAS TRSRFDTTQR QLSWQHDVAV GGGSLMAAYE FLQQRVKTTS DFEKTRRHIN AFLLGWGGEF DRHNVQLNAR HDRNSQFGGK TTGAAAYGYR LAPEWRAHAS IGTAFKAPTF NDLYFPVECY GAWGCFGGNP DLEPEEALNR ELGVAWERNG VGVDLTYFNN RIKNLIDWST GIASNVGRAD IQGIEAALSA TLGDYRLRAS VDLLDAEDDE TGDQLGRRAR VGGALALERA VGAWTWGVEW NGKGRRYDQV PNAVSNRLGG YGLVDAYAHY AVARDWSVEV RANNLLDKDH ELAKGFATQG RSAFVALRYA MH
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