| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3727 |
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| Symbol | |
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| ID | 7873726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 4095617 |
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| End bp | 4097863 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643700673 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002890697 |
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| Protein GI | 237654383 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCCGA ACAAGCCCTC CACATCGCAG CCTCCGGGAG CCATGGTCAC TCCGGCCGAC
AACGGGTTAA GGCCTCGGAT CGACGCCACC GCCGGCGACG ACGCCGACAG CGTCCGCATC
CTGATCGTCG ATGACGATCC GGCCCTGCGC CGCACCTTTC CGCATGCACT CGCCCGCCCC
GGGCGCCTCT TCGACGAATG CGGCAGCATC GGCGAGGCGA TCGGCCGCCT GGAGAAGCAG
CGCTACGCGC TGATCCTGCT CGACTACCGT CTCCCCGACG CCAACGGCCT CGCGCTGCTC
GACTGGCTGT CCGACCACCA GCGCGACGAG GCGGTGATCA TCATCAGCGG CGAGGACGCG
ATCGACGCGG CGATCGGCGC GCTGCGCGGC GGCGCCGACG ACTACGTGCG CAAGCCCTAT
CACGTGGCGC AGCTGCAGCG CGCGGTCGAC GGCGCCCTGC ACAAGGGCAC GCTCGAACGC
GCCAACAAGC TGATGAGCCA GCGCCTGAAG GATTCGGAGC GCCTGCACCG CTACCTGGTG
GAGAGCTCGC CCGACATGAT CTTCACCCTC GACGGCAGCG GCCGCTTCAC CTACATCAAC
CCGCGCATCA AGGCCCTGCT GGGCTACGAC CGCAGCGCGC TGGTCAAGCG CCCCTTCACC
ACCCTGGTGA TGCCCGAGGA CCTCGACCGC ATCGACACCC TGCTCAGCCA GCCGAGCAGC
CTGCCGGGCG AGAGCTTCCA CGTCGAGCTG CGCCTGCGCT CGCGGCGCGA CGGTGGTGGC
GAGGGCGGCA GCGTCACCGT GTCGCTGACC GGCATCCCGA TGGTCACGCA GGAGAACGAC
CGCCGCGTGA TCGGCCTCTA CGGCGTGGCG CGCGACATCT CCGAGCGCAA GCGCGCCGAG
GAGATCATCT CCTTCCAGGC CTATCACGAC CAGCTCACCC ACCTGCCCAA CCGGGTGCTG
TTCAAGGACC GCCTCGAACT CGCGATCGCG CAGGCGCAGC GCCGCACCGG CGCGCTCGCG
GTGATGTTCA TCGACATCGA CCGCTTCAAG CTGGTCAATG ACACCTTCGG CCACGCCGAG
GGCGACCTGC TGCTGCGTGC GATCGCGAGC CGGCTGTCGG CCACGCTGCG CCGCGGCGAC
ACACTCGCCC GCCTCGGCGG CGACGAATTC ACCGTGCTGC TCCCGGACAT CAACCAGCCC
GAGGACGCCG AGGTCATCGC GCGCAAGGTG CTCGACGCAC TCGCCACCCC GGTGCGGCTC
AGCCAGGGCG AATTCCGTGC CACGGTCAGC GTCGGCATCG CGCTCTTCCC GCGCGACGGC
ACCACTGCCG AGGACCTCAC CCGCCACGCC GACGCGGCGA TGTACCAGGT CAAGCGCTCC
GGCAAGAACG CCTTCCGCTT CTTCGACCCC GAGCTCAACA CCCGCCATCG CGACCGCATC
GCGCTCGAGA ACGACCTGCG CGGCGCGGTC GCCCGCGGCG AGCTCGACCT GCATTACCAG
CCCCAGGTCA GCCTGGCGAC GCGCGGCATC GTCGGCCTCG AGGCCTTGTT GCGCTGGAAC
CATCCGGGCC TGGGCGCGAT TCCGCCCGCG ACCTTCATCC AGGTGGCCGA AGAGGTCGGC
CTCATCAGCG AGATCAGCAA CTGGGTGCTG GAGACGGCCT GCGCGCAGCT CGCACGCTGG
CAGGCGGAGG GCGTCGGCGC CCCGCGCGTG TCGATCAACC TGTCGGCCTG CGACTTCCAG
CGCGGCGACG TGGTCGGCAG GATCCGCGCC TGCCTCGACC GCCACGGCGT GGCACCGTCA
TGCCTCGAGG TGGAGATCAC CGAGGGCCTG ATGATGGACG ACACCGCCGA CATCGCCGCC
AAGGTGCGCG CGCTGCGCGA GGCCGGCATC AGCGTGGCGA TCGACGACTT CGGCACCGGC
TACTCGGCGC TCGCCTACCT GCAGCGCTTC CCGGTCAGCA CGCTGAAGAT CGACCGTAGC
TTCGTGCGTG ACCTCGAAGG CCCGATGACC AACCCGATCA TCTCGGCCAT CACCGGCATC
GCACGCGGCT TCGATCTCGA CCTCGTCGCC GAGGGCGTGG AGAATCTCGA GCAGGCCGAC
GCGCTGCGCG CGCTCGGCTG CGAGGTGATG CAGGGCTACC TGTTCGCCCG CCCCGCCCCG
GCCGGCGAGG TGCCGGGCTG GCTGCGCCAG CCCGAACGGC TCTTCCTCGG CGCCGGCAGC
GCGGACCTGC AGGCCGCACC GGCGTAA
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| Protein sequence | MRPNKPSTSQ PPGAMVTPAD NGLRPRIDAT AGDDADSVRI LIVDDDPALR RTFPHALARP
GRLFDECGSI GEAIGRLEKQ RYALILLDYR LPDANGLALL DWLSDHQRDE AVIIISGEDA
IDAAIGALRG GADDYVRKPY HVAQLQRAVD GALHKGTLER ANKLMSQRLK DSERLHRYLV
ESSPDMIFTL DGSGRFTYIN PRIKALLGYD RSALVKRPFT TLVMPEDLDR IDTLLSQPSS
LPGESFHVEL RLRSRRDGGG EGGSVTVSLT GIPMVTQEND RRVIGLYGVA RDISERKRAE
EIISFQAYHD QLTHLPNRVL FKDRLELAIA QAQRRTGALA VMFIDIDRFK LVNDTFGHAE
GDLLLRAIAS RLSATLRRGD TLARLGGDEF TVLLPDINQP EDAEVIARKV LDALATPVRL
SQGEFRATVS VGIALFPRDG TTAEDLTRHA DAAMYQVKRS GKNAFRFFDP ELNTRHRDRI
ALENDLRGAV ARGELDLHYQ PQVSLATRGI VGLEALLRWN HPGLGAIPPA TFIQVAEEVG
LISEISNWVL ETACAQLARW QAEGVGAPRV SINLSACDFQ RGDVVGRIRA CLDRHGVAPS
CLEVEITEGL MMDDTADIAA KVRALREAGI SVAIDDFGTG YSALAYLQRF PVSTLKIDRS
FVRDLEGPMT NPIISAITGI ARGFDLDLVA EGVENLEQAD ALRALGCEVM QGYLFARPAP
AGEVPGWLRQ PERLFLGAGS ADLQAAPA
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