Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_3727 |
Symbol | |
ID | 7873726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 4095617 |
End bp | 4097863 |
Gene Length | 2247 bp |
Protein Length | 748 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643700673 |
Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | YP_002890697 |
Protein GI | 237654383 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGCCGA ACAAGCCCTC CACATCGCAG CCTCCGGGAG CCATGGTCAC TCCGGCCGAC AACGGGTTAA GGCCTCGGAT CGACGCCACC GCCGGCGACG ACGCCGACAG CGTCCGCATC CTGATCGTCG ATGACGATCC GGCCCTGCGC CGCACCTTTC CGCATGCACT CGCCCGCCCC GGGCGCCTCT TCGACGAATG CGGCAGCATC GGCGAGGCGA TCGGCCGCCT GGAGAAGCAG CGCTACGCGC TGATCCTGCT CGACTACCGT CTCCCCGACG CCAACGGCCT CGCGCTGCTC GACTGGCTGT CCGACCACCA GCGCGACGAG GCGGTGATCA TCATCAGCGG CGAGGACGCG ATCGACGCGG CGATCGGCGC GCTGCGCGGC GGCGCCGACG ACTACGTGCG CAAGCCCTAT CACGTGGCGC AGCTGCAGCG CGCGGTCGAC GGCGCCCTGC ACAAGGGCAC GCTCGAACGC GCCAACAAGC TGATGAGCCA GCGCCTGAAG GATTCGGAGC GCCTGCACCG CTACCTGGTG GAGAGCTCGC CCGACATGAT CTTCACCCTC GACGGCAGCG GCCGCTTCAC CTACATCAAC CCGCGCATCA AGGCCCTGCT GGGCTACGAC CGCAGCGCGC TGGTCAAGCG CCCCTTCACC ACCCTGGTGA TGCCCGAGGA CCTCGACCGC ATCGACACCC TGCTCAGCCA GCCGAGCAGC CTGCCGGGCG AGAGCTTCCA CGTCGAGCTG CGCCTGCGCT CGCGGCGCGA CGGTGGTGGC GAGGGCGGCA GCGTCACCGT GTCGCTGACC GGCATCCCGA TGGTCACGCA GGAGAACGAC CGCCGCGTGA TCGGCCTCTA CGGCGTGGCG CGCGACATCT CCGAGCGCAA GCGCGCCGAG GAGATCATCT CCTTCCAGGC CTATCACGAC CAGCTCACCC ACCTGCCCAA CCGGGTGCTG TTCAAGGACC GCCTCGAACT CGCGATCGCG CAGGCGCAGC GCCGCACCGG CGCGCTCGCG GTGATGTTCA TCGACATCGA CCGCTTCAAG CTGGTCAATG ACACCTTCGG CCACGCCGAG GGCGACCTGC TGCTGCGTGC GATCGCGAGC CGGCTGTCGG CCACGCTGCG CCGCGGCGAC ACACTCGCCC GCCTCGGCGG CGACGAATTC ACCGTGCTGC TCCCGGACAT CAACCAGCCC GAGGACGCCG AGGTCATCGC GCGCAAGGTG CTCGACGCAC TCGCCACCCC GGTGCGGCTC AGCCAGGGCG AATTCCGTGC CACGGTCAGC GTCGGCATCG CGCTCTTCCC GCGCGACGGC ACCACTGCCG AGGACCTCAC CCGCCACGCC GACGCGGCGA TGTACCAGGT CAAGCGCTCC GGCAAGAACG CCTTCCGCTT CTTCGACCCC GAGCTCAACA CCCGCCATCG CGACCGCATC GCGCTCGAGA ACGACCTGCG CGGCGCGGTC GCCCGCGGCG AGCTCGACCT GCATTACCAG CCCCAGGTCA GCCTGGCGAC GCGCGGCATC GTCGGCCTCG AGGCCTTGTT GCGCTGGAAC CATCCGGGCC TGGGCGCGAT TCCGCCCGCG ACCTTCATCC AGGTGGCCGA AGAGGTCGGC CTCATCAGCG AGATCAGCAA CTGGGTGCTG GAGACGGCCT GCGCGCAGCT CGCACGCTGG CAGGCGGAGG GCGTCGGCGC CCCGCGCGTG TCGATCAACC TGTCGGCCTG CGACTTCCAG CGCGGCGACG TGGTCGGCAG GATCCGCGCC TGCCTCGACC GCCACGGCGT GGCACCGTCA TGCCTCGAGG TGGAGATCAC CGAGGGCCTG ATGATGGACG ACACCGCCGA CATCGCCGCC AAGGTGCGCG CGCTGCGCGA GGCCGGCATC AGCGTGGCGA TCGACGACTT CGGCACCGGC TACTCGGCGC TCGCCTACCT GCAGCGCTTC CCGGTCAGCA CGCTGAAGAT CGACCGTAGC TTCGTGCGTG ACCTCGAAGG CCCGATGACC AACCCGATCA TCTCGGCCAT CACCGGCATC GCACGCGGCT TCGATCTCGA CCTCGTCGCC GAGGGCGTGG AGAATCTCGA GCAGGCCGAC GCGCTGCGCG CGCTCGGCTG CGAGGTGATG CAGGGCTACC TGTTCGCCCG CCCCGCCCCG GCCGGCGAGG TGCCGGGCTG GCTGCGCCAG CCCGAACGGC TCTTCCTCGG CGCCGGCAGC GCGGACCTGC AGGCCGCACC GGCGTAA
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Protein sequence | MRPNKPSTSQ PPGAMVTPAD NGLRPRIDAT AGDDADSVRI LIVDDDPALR RTFPHALARP GRLFDECGSI GEAIGRLEKQ RYALILLDYR LPDANGLALL DWLSDHQRDE AVIIISGEDA IDAAIGALRG GADDYVRKPY HVAQLQRAVD GALHKGTLER ANKLMSQRLK DSERLHRYLV ESSPDMIFTL DGSGRFTYIN PRIKALLGYD RSALVKRPFT TLVMPEDLDR IDTLLSQPSS LPGESFHVEL RLRSRRDGGG EGGSVTVSLT GIPMVTQEND RRVIGLYGVA RDISERKRAE EIISFQAYHD QLTHLPNRVL FKDRLELAIA QAQRRTGALA VMFIDIDRFK LVNDTFGHAE GDLLLRAIAS RLSATLRRGD TLARLGGDEF TVLLPDINQP EDAEVIARKV LDALATPVRL SQGEFRATVS VGIALFPRDG TTAEDLTRHA DAAMYQVKRS GKNAFRFFDP ELNTRHRDRI ALENDLRGAV ARGELDLHYQ PQVSLATRGI VGLEALLRWN HPGLGAIPPA TFIQVAEEVG LISEISNWVL ETACAQLARW QAEGVGAPRV SINLSACDFQ RGDVVGRIRA CLDRHGVAPS CLEVEITEGL MMDDTADIAA KVRALREAGI SVAIDDFGTG YSALAYLQRF PVSTLKIDRS FVRDLEGPMT NPIISAITGI ARGFDLDLVA EGVENLEQAD ALRALGCEVM QGYLFARPAP AGEVPGWLRQ PERLFLGAGS ADLQAAPA
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