Gene Tmz1t_3694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3694 
Symbol 
ID7873693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp4060716 
End bp4062170 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content69% 
IMG OID643700640 
ProductDeoxyribodipyrimidine photo-lyase 
Protein accessionYP_002890664 
Protein GI237654350 
COG category[L] Replication, recombination and repair 
COG ID[COG0415] Deoxyribodipyrimidine photolyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCCG CCCTCGTCTG GTTCCGCCGC GACCTGCGCA GCTTCGATCA CGCTGCGCTC 
CACCACGCCC TGCGCTTCGC CGAGCGCGTG CATTGCGCCT TCGTCTTCGA TACCGCCATC
CTTGACGCGC TGCCCGCGCG CGCCGACCGC CGCGTCGAGT TCATCCACGC CAGCCTGGCC
GAGCTGGATG CGGCGCTCGA CGCCATGGCG CGTGCCGCGG GTGGCACGGG AGGCGGGCTG
ATCGTCCGCC ATGGCCGCGC CGAGGACGAG ATCCCGCGCC TGGCCGCCGA GCTTGGCGTC
GACAAGGTCT TCGCCAACCG CGACTACGAA CCCGACGCGA TCCTGCGCGA CAGCCGGGTC
GCGCAGCGAC TCGCCGAGGA CGGCATCGGT TACGAGGACT TCAAGGACCA GGTGGTCTTC
GAGCGTGACG AGGTGCTCAC CCAGACGGGC AAGCCCTACA GCGTGTTCAC GCCTTACAAG
AACGCCTGGC TGAAGGCGGT GGACGATTCC CAGGTCAGCT CGCATGCGGT GGAGAAGTAC
GCCGCGCACC TGGCGCCGAA GCCCGCCGGC GAGACCCTGC CCGGGCTGGC CGACATCGGC
TTCGCGCCCA CCAACCTCGC CGAGCTGAAC ATGCCTGTGG GCATGAGCGG CGGCAAGCGC
CTGTTCGACG ACTTCGCCGC GCGCATCGAG CGCTACAAGC GCGCGCGCGA CTTCCCGGCG
GTGAAAGGCG TCAGCTATCT GTCCACCCAC CTGCGCTTCG GCACCGTGTC GATCCGCCAG
CTCGCCGCCC ACGCCCGCGC GCGCGGCGGC GAGGGGGCGG AGACCTGGCT GTCGGAGCTG
ATCTGGCGCG ACTTCTACCA CCAGATCCTG TGGCACCACC CGCAGGTGGT GGACCGTGCC
TTCCGTCCCG AGTACGACGC CGTGCAGTGG GACGACGCGC CCGAGCTCTT CGCCGCCTGG
TGCGAGGCGC GCACCGGCTA TCCGATCGTC GATGCGGCGA TGCGCCAGCT CGACCAGACT
GGCTGGATGC ACAACCGCCT GCGCATGATC GTCGCCTCCT TCCTCACCAA GGACCTCGGC
GTCGACTGGC GCCTGGGCGA GCGTTACTTC GCCATCCGGC TCAACGACTA CGACCTCGCC
GCCAACAACG GCGGCTGGCA GTGGGCGGCC TCGACCGGCT GCGACGCCCA GCCCTGGTTC
CGCATCTTCA ACCCGGTCAC TCAGTCCGAG AAGTTCGACC CCGAGGGCCG CTTCATCCGC
CGCTACCTGC CCGAACTCGC GCGCGTGCCC GACAAGTTCA TCCACGCCCC CTGGACCATG
GGCGGCATCG ACCAGACCGC GTGCCGGACG AAGATCGGCG TCGATTACCC CGGACCGATC
GTGGATCACG CCGCTGCGCG TGAGCGCACG CTGCAACGTT TCGGCGTGGT GAAGAACGAC
GCGCAAGGCA CATAG
 
Protein sequence
MSSALVWFRR DLRSFDHAAL HHALRFAERV HCAFVFDTAI LDALPARADR RVEFIHASLA 
ELDAALDAMA RAAGGTGGGL IVRHGRAEDE IPRLAAELGV DKVFANRDYE PDAILRDSRV
AQRLAEDGIG YEDFKDQVVF ERDEVLTQTG KPYSVFTPYK NAWLKAVDDS QVSSHAVEKY
AAHLAPKPAG ETLPGLADIG FAPTNLAELN MPVGMSGGKR LFDDFAARIE RYKRARDFPA
VKGVSYLSTH LRFGTVSIRQ LAAHARARGG EGAETWLSEL IWRDFYHQIL WHHPQVVDRA
FRPEYDAVQW DDAPELFAAW CEARTGYPIV DAAMRQLDQT GWMHNRLRMI VASFLTKDLG
VDWRLGERYF AIRLNDYDLA ANNGGWQWAA STGCDAQPWF RIFNPVTQSE KFDPEGRFIR
RYLPELARVP DKFIHAPWTM GGIDQTACRT KIGVDYPGPI VDHAAARERT LQRFGVVKND
AQGT