Gene Tmz1t_3692 details

Gene Information

• Locus tag: Tmz1t_3692
• ID: 7873691
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 4053526
• End bp: 4059249
• Gene Length: 5724 bp
• Protein Length: 1907 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 643700638
• Product: CheA signal transduction histidine kinase
• Protein accession: YP_002890662
• Protein GI: 237654348
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0643] Chemotaxis protein histidine kinase and related kinases

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACACG CCACCGAGCC GGACCTGGGA CCGCTGACCT GGGTGAAGGG CGAGATCGAC 
GCCGCGCTGG GGCGCGCGCG CGAAATCCTC GAGCGCGGCT GCGCAGGCAG CGAAGCCGCC 
GGCCTGCAGT TCGCGCAATC GCACCTGCAC CAGGTGCGCG GCGCCCTCGA CATCGTCGGC 
CTCGACGGCC TGACGCTGTT CACCGACGCC CTCGAGCAGC TGCTCGGGGC GATGGCGCGC 
GGCGAGGTCC CGGCCGACGC CGCGCGCCAC GCGCTCGCCC TGCGCGCGCT GGCGATGGTG 
GGCAACTACC TCGAGGAGCT CGCCGACGGC GCGCCCGACC AGCCGCTGCG GCTGGCCGCG 
CGCTACCTCG AGCTCGCCGC AGCGCGCGGG CAGCACGACG CCAGCGCCGC CGACCTCTTC 
CATCCCGATC TTTCGCGCCG CCCGCCTGCG CGTGCGGCGC CGCCGGCGGA CACGACCGGG 
AGCGAGGCGC GGGAGCTGCG CGCGGCACGC AGCCGCTTCG AGCGCGGTCT GCTGGAGTGG 
CTGCGCAAGG GCGCGGCGGG CGAAGGCGCG CGCGTCATGC GCGACGCGAT CGCCGAGGTC 
GAGGCGCAGC AGCGCAGCCC GGCTGCGCGC AGTCTGTGGT GGGCCAGCCT CGCGTTCTAC 
GACGCCCTGA TCCACGGCGG GCTGCAGCCC GACCCGGCGG TGAAGCGCCT GTGCACCCAG 
CTCGACGCCC AGTTCCGCCG CCTGCTGAGC GGCACGCCCT CGGTGCCGGA CCGTCTGCTG 
CGCGAACTCC TCTACCAGAT CGCGCGCGCC CCGGTGCGCA CTGAACAGCA GCGTGCGGTA 
CGCGCGTGCT GGCAGCTCGA CGCGCAGATC CCGGAGCCGG GGCTGGAGGT CGGCGAGACA 
CCGATCGCGC CGCTGCTCGA CGCCCTCGCC GCCCGCCTCG GCGAGGCGCG CGCGCATTGG 
GAAGCCTTCT GCGCCGGCAC CGCGGTGGCC CTGCCCCGCT TCGAGGATGC AGTCGCGGCG 
ATGAGCGCCC CCGCCGAGGC GCTCGGCCGC CCGGGCGTGC GCATCCTGTG CGCCGCACTG 
CTCGACTTCG CGCGCTGGCT GCGCCGCGAT CCGCTGCAGT TCGTCGAGAC CTCGGGCATG 
GAGGTCGCCA CCGCGCTGCT GAGCCTCGAA GGCGCGCTCG ACCGTCGTCC GCCGCCCGCC 
GGATTCGGCG CGCGCGCGGA ACAGATCGCC GCCCGTCTGC TCGCCCTGCA GCGCGGCGAG 
CCCCTGTCCG CGGGCGCGAT CGTCGCAGCA CCGGCGGATG CCCGCCAGGC GCAGGAGCGC 
GCCGCGCTCG AGCAGGTGGC GAAGGAGATG CTCGCCAGCC TCGCCCACGT CGAACAGGTG 
CTGGACGACT TCTTCCGCAA CCAGGCCAGG CGCGAGCCCC TGCTGCAGCT CCACCAGCCG 
CTGCAGCAGA TCATCGGTGC CCTGAGCATG CTCGGCGAGA CCGACGCGCT CGCCCTGGTG 
CGCAACGCCG CGATCCACAT CGCCAGCCTC GCGCGCGAGG ACAGCCGCGC CGGCCAGGCC 
GAGTTCGAAC GCCTCGCGCG CGACCTCTCC GCGCTCGGCT TCTACATCGA GGCGATGCCG 
CGCGGCGGCG CCCGCCTGGA AGAACTGCTC GACCCGAGCC TGGGGCTCCA GGGCAGGCCG 
GCTGCACAGG AGGACGCGGC AGCGCCCGCT GCCGCGATCG CCGCCACACC TGTGGCGGCA 
CCGGCACCGA CGCCCGCGAC CGAAGCCGCC GCGGCGGCGC CCGTCGAGAT GCCCGAGCCG 
CCGCCGCCCG CGGCCGCGGA GCCGCCTCCA CAAGACCTGG ACGCCGCGGC GACGCAGGTC 
GCAGCGGCCC ACCCGGAGAG CCCCGAAAAC CTGTTCGGCC TCGACTTCCC CGATCTCGAC 
TTCAGCCCCC TCGAAGAACT CGAGACACCT GCCGCAATGC CGCAGGCCGC GACAGAGCCC 
GTCGGCACCG ATGCGCGGGC GCCTGCCGCC GCCCCCGAAC TCGCCGCCAC GGTCGCCGCG 
GAGAGCGCAG CCGCCCCGAT GGCCGCAGGG GCGGCGCCGG TGGGCGCGGA GATCGACGCC 
GAACTGCTGG CGATCTTCAT CGAGGAGGCG CACGAGGTGC TCGCCGGGAT CGCGGCCGGG 
CTCGAAGCAC TCCGCGACGG CACGGACGAG CCCGCGCAAC TGGTCACCAT CCGGCGCGGC 
TTCCACACCC TCAAGGGTAG CGGGCGCATG GTCGGGCTCG TCCAGCTCGG CGACACCGCG 
TGGGCGGTGG AGCAGGCGCT GAACCGCTGG CTGCAACTCG ACTGGGCGCT CACCCCCGCC 
TTGTTCGCCC TCGTCGCCGA GGGCCATCGG GTGTTCTCCG CCTGGGTGGC GCAACTCGAA 
CATGGCGAGG CCGGCGGTGG CGACACCGCG GCTCTGATCG CCGAGGCGAG ACGGCTCCAC 
GAAGCGGCCG AGCCGGTGCA CGACGCCGGC ATCACCACGC CGAGCGGAGC GCTCCCGCCC 
CTCCCCGAGC CGATCGAGGA GATCGAGGCG GAACCCGCCG CCATGGCCCC CGCCTCCGCG 
CCGATGCAGA TCGACAGCGT GGACTTCCTG CTCGACGGCG AGATCGGCGG AGCCCCGCCG 
GCCCCCCCAG CGGGCACGGA GGAGACCACG CCCGTGTTCC CCGCCGCGAC CGCGGCGAGC 
GCAACCGAAG AAGAGCTGAT CGAATTCATC GAGCCGCTCG ACGAGGGCGC CCCGATCGCG 
CTGGAAGCCT TCGAGTTCTT CCCGGCGCAG CCGGACGAAG TGCGAATCGA AGGCGGAGAC 
GACGAGGTCG CCCCCGCACA GGCGCCCGCC GCAACGCAGG ACGACGCGCC CGCCAGCGAT 
GTCGTCGCCA GCCCCGCTGG CGACACCCTG CGCATCGGCG ACGGCGAGAT CTCGCGTGCG 
CTGCACGCGC TCTACTGCAG CGAATCGGCC CAGCACCTGG CCGCGCTCGA GCAGGCGCTG 
CGCGCGCTGC ACGCGGGCGA CGAGCCCCCC TCGACCGCCG CGATACGCGC CGCCCATACC 
CTGGCCGGCA TCTCGGGCAC CGTGCGCGCA GAGGCCGCGC ATCGCCTCGG CCGCGCCCTG 
GAGCACCGCC TGGAACGCCT CGCCGACGCC GCCCGGGCTC CGGACGGGAA CGAGCTGGCG 
CTGTTCGGCG AGGCTCTCGA CGCCCTGCGC GCGATGCGCG ACGAGATCGC CGCGGGCGGC 
ACGCCGGCGG CGGAGGATGC ACTCGTCGCA CGCCTGGACG CTCGCGCCGA CGAAGACAGC 
GCAGGCCTGG CCGACCTGTC CGAGGTCCTC GCTCCCGACA TCGCCCTCGC TCCCGACATC 
GCCCTCGCTG TCGACGCGCA GACCGCACTC GACGGCGCGC GCGCCGCCGA CCACGCGCCC 
CCCCCGCCAG CGGCTCCCGC GAGCCTACCC GCAGCGCTCC CCGCGGCGGA GGCGGGCGCC 
GTGGACAGTG CGCAGGACGA CATCGACAGC CAGCTGCTGC CGATCTTCCT CGAAGAGGCC 
GCCGAGACCA TCGGCGAGCT CCACGCCACC CTGCGCCGCT GGCGCATGCA GGCCGACGAC 
GAAGAGGCGC CGCGTGCGGT CGCGCGCCTG CTGCACTCGC TCAAGGGCAG CGCGCGCATG 
GCGGGCGCGA TGCGCCTCGG CGCCCACCTG CACGAACTCG AGTCGCGCCT GGAGGACGGC 
CTCGCCGCGC GCGAGGCGGC GGCCGGGCTC GCCGAAGCGC TCGCGCACGG CATCGACCGC 
TGCGAGCAGG TCATCGACGA GCTCGCCCTC GGCGAAGCGG CCCTCCAGGC GCCGGCCGCC 
CCGATCCGCG CCGAGGAAGC CGGCGCCGGC GCGGAGGCGG CACCCGAGGT CGAGCCGCTC 
GCCTCCCCGA CCCTGCGTGT GCGCGCCGAG CGGATCGACC GCTTCGTCAA CCAGGCCGGC 
GAGATCGGCG TCGCGCGCAG CCGGGTCGAG GGCGAGCTGC GCAGCCTGCG GCGCTCGCTG 
CTCGATCTCA CCGAGAACGT GATCCGCCTG CGCAACCAGC TGCGCGAGGT CGAGATCCAG 
GCCGAGGTGC AGATGCAATC GCGCATCGCG CAGGCCGGCA CCCAGCACAC CGATTTCGAT 
CCGCTCGAGC TCGACCGCTA CACCCGCCTG CAGGAGCTCA CGCGGATGAT GGCCGAGAGC 
GTCAACGACG TGACCACCGT GCAGCAGGGC CTGCTGCACA ACCTGGACGG CGCGGAGCTC 
GCCCTCGGCA GCCAGGCGCG CATGGCGCGC GAGCTGCAGC AAGGGCTGAT GCAGGTGCGC 
ATGCTGCCCT TCGACAACCT TGCCAGCCGG CTCTACCGGG TGGTGCGGCA GAGCGCGCGC 
GAGCTCGGCA AGCGTGCCGC GCTCGACCTT CGCGGCGGAC GCATCGAGGT CGACCGCAGT 
GTGCTCGAGC AGATGGCCGC GCCGCTCGAA CACCTGCTGC GCAACGCGGT CGCGCACGGC 
ATCGAGGCCC CGGCCGCGCG CCTGGCCGCC GGCAAGGCCG AGACCGGCAA CATCGAGCTG 
ACGGTGCGCC AGGAGGGCAA CGAGATCGCC ATCGAGATCG CCGACGACGG CGCCGGGCTC 
GACCTCGAGC GCATCGCGGC GCAGGCGCGC GCGCGCGGTC TGCTCGGCGC CGACGAGCGC 
GTCGACGAGC GCCGCCTGGT GAACCTGATC TTCGTCTCCG GCTTCAGCAC CGCGCGCGAG 
GTCTCCGCGG TCTCCGGCCG CGGCGTCGGC ATGGACGTGG TGAAGGCGCA AACCGCCGCC 
GCCGGTGGCC GCGTCGAGGT CGCCAGCCGG CCCGGCGCCG GCACCCGCTT CTCGATCCGC 
CTGCCGCTCA CCCTCGCGGT AACCCAGACC TTGCTGGTGG AGGCGCTCGG CCGCAGCTGG 
GCCGTTCCCG CCAACATGAT CGTGCAGGCC ATGGAGCTCA AGCCCGACGC GCTGCAGGCC 
ATGCAGCGGG CGCACGGCAT CGAATGGCAG GGCGAGCATT ATCCCTACCG CTATCTGCCG 
CGCCTGCTCG GCGATCGCGA GGCGCGCCCC GCCGAGGCGC GCTACAGCTG GGTGCTGCTG 
CTGCGCGCCG GCGCGCAGAC GCTCGCGCTG CATGTCGACG GGCTGCGCGG CAACCAGGAA 
GTCATCGTCA AGAACGCCGG CCCGCAGCTC ACCCGCGTCG TCGGCATGAG CGGCGCGACC 
GTGCTTGGCG ACGGCGAGAT CGTGCTGATC CTCAACCCGG TCGCGCTCGG CGCGCGCGCC 
GCCACCACCA TGGACGAGGC GCACGCGGGG TTGTTCGGTC CCGCTGCCGA GGCGCCGCCG 
CCGCTGCACC TGCCCACGGT GATGGTGGTG GACGACTCGC TGACCGTGCG CAAGATCACC 
GGTCGCCTGC TCGAGCGCGA GGGCTATCGC GTGCTCACCG CCAAGGACGG CGTGGACGCG 
CTCGAGCAGC TCATCGACCT GAAGCCCGAC GTGGTGCTCA CCGACATCGA GATGCCGCGC 
ATGGACGGCT TCGACCTCGT CCGCAACATC CGCGCCGACG CGCGCCTGCA CGACCTGCCG 
GTGGTGGTGA TCACCTCGCG CCTGGCGGAG AAGCACCGCC GTTACGCCCT GGAGGTCGGC 
GCCGACCACT ACCTCGGCAA GCCCTACCAG GAAGAGGAGC TGCTCGCGCT GGTGGCGCGC 
TACGCACAGG CGGGCAAGGG CTGA 

 

Protein sequence

MTHATEPDLG PLTWVKGEID AALGRAREIL ERGCAGSEAA GLQFAQSHLH QVRGALDIVG 
LDGLTLFTDA LEQLLGAMAR GEVPADAARH ALALRALAMV GNYLEELADG APDQPLRLAA 
RYLELAAARG QHDASAADLF HPDLSRRPPA RAAPPADTTG SEARELRAAR SRFERGLLEW 
LRKGAAGEGA RVMRDAIAEV EAQQRSPAAR SLWWASLAFY DALIHGGLQP DPAVKRLCTQ 
LDAQFRRLLS GTPSVPDRLL RELLYQIARA PVRTEQQRAV RACWQLDAQI PEPGLEVGET 
PIAPLLDALA ARLGEARAHW EAFCAGTAVA LPRFEDAVAA MSAPAEALGR PGVRILCAAL 
LDFARWLRRD PLQFVETSGM EVATALLSLE GALDRRPPPA GFGARAEQIA ARLLALQRGE 
PLSAGAIVAA PADARQAQER AALEQVAKEM LASLAHVEQV LDDFFRNQAR REPLLQLHQP 
LQQIIGALSM LGETDALALV RNAAIHIASL AREDSRAGQA EFERLARDLS ALGFYIEAMP 
RGGARLEELL DPSLGLQGRP AAQEDAAAPA AAIAATPVAA PAPTPATEAA AAAPVEMPEP 
PPPAAAEPPP QDLDAAATQV AAAHPESPEN LFGLDFPDLD FSPLEELETP AAMPQAATEP 
VGTDARAPAA APELAATVAA ESAAAPMAAG AAPVGAEIDA ELLAIFIEEA HEVLAGIAAG 
LEALRDGTDE PAQLVTIRRG FHTLKGSGRM VGLVQLGDTA WAVEQALNRW LQLDWALTPA 
LFALVAEGHR VFSAWVAQLE HGEAGGGDTA ALIAEARRLH EAAEPVHDAG ITTPSGALPP 
LPEPIEEIEA EPAAMAPASA PMQIDSVDFL LDGEIGGAPP APPAGTEETT PVFPAATAAS 
ATEEELIEFI EPLDEGAPIA LEAFEFFPAQ PDEVRIEGGD DEVAPAQAPA ATQDDAPASD 
VVASPAGDTL RIGDGEISRA LHALYCSESA QHLAALEQAL RALHAGDEPP STAAIRAAHT 
LAGISGTVRA EAAHRLGRAL EHRLERLADA ARAPDGNELA LFGEALDALR AMRDEIAAGG 
TPAAEDALVA RLDARADEDS AGLADLSEVL APDIALAPDI ALAVDAQTAL DGARAADHAP 
PPPAAPASLP AALPAAEAGA VDSAQDDIDS QLLPIFLEEA AETIGELHAT LRRWRMQADD 
EEAPRAVARL LHSLKGSARM AGAMRLGAHL HELESRLEDG LAAREAAAGL AEALAHGIDR 
CEQVIDELAL GEAALQAPAA PIRAEEAGAG AEAAPEVEPL ASPTLRVRAE RIDRFVNQAG 
EIGVARSRVE GELRSLRRSL LDLTENVIRL RNQLREVEIQ AEVQMQSRIA QAGTQHTDFD 
PLELDRYTRL QELTRMMAES VNDVTTVQQG LLHNLDGAEL ALGSQARMAR ELQQGLMQVR 
MLPFDNLASR LYRVVRQSAR ELGKRAALDL RGGRIEVDRS VLEQMAAPLE HLLRNAVAHG 
IEAPAARLAA GKAETGNIEL TVRQEGNEIA IEIADDGAGL DLERIAAQAR ARGLLGADER 
VDERRLVNLI FVSGFSTARE VSAVSGRGVG MDVVKAQTAA AGGRVEVASR PGAGTRFSIR 
LPLTLAVTQT LLVEALGRSW AVPANMIVQA MELKPDALQA MQRAHGIEWQ GEHYPYRYLP 
RLLGDREARP AEARYSWVLL LRAGAQTLAL HVDGLRGNQE VIVKNAGPQL TRVVGMSGAT 
VLGDGEIVLI LNPVALGARA ATTMDEAHAG LFGPAAEAPP PLHLPTVMVV DDSLTVRKIT 
GRLLEREGYR VLTAKDGVDA LEQLIDLKPD VVLTDIEMPR MDGFDLVRNI RADARLHDLP 
VVVITSRLAE KHRRYALEVG ADHYLGKPYQ EEELLALVAR YAQAGKG