| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3678 |
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| Symbol | |
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| ID | 7873183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 4039321 |
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| End bp | 4041228 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643700624 |
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| Product | ribonuclease II |
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| Protein accession | YP_002890648 |
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| Protein GI | 237654334 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGTGC TGTATGAAGA GGACGGGGCC TTCAAGGCCG GAACCATCCT CGCCGATAAC
GACGCCACGC TGCAGGTCGA GAACACCCAC GGCAAGCGGG TGAAGCTCAA GCGCGCCCAT
GTGCTGATGG AGTTCCGCGA GCCGGGGCCT TCCGACCTGC TCGCGCGCGC CGAGGCCGAG
GCCGAAGGCC TGGACGTCGA ATTCCTCTGG GAAGTGTGCG GCGACGACGA GTTCGCCTTC
GCCGACTTCG CCGCCGAATA TCACGGCCAT GTTCCGAACG CGGTCGAATC GGCCGCCCTG
CTGCTGCGCC TGCACTCGGC GCCGATCTGG TTCCACCGCA AGGGACGCGG GCGCTTCCGC
AAGGCCCCCG CCGACATCCT CCAGGCCGCG CTCGCCGGCC TCGAGAAGAA GCGCCAGCAG
GCCGCCGCGA TCGAGCACAT GCGCGCCGAA CTGGTCGCCG GGCGCCTGCC GCCCGAGCTC
GCCGCGCTGC TGCCGCAGGC GCTCTACCGC CCCGACCGCA ACCGCCCAGA GATCAAGGCG
CTCGAAGCCG CCTGCGTCGA CAGCGGGCTG TCGGCCGCGC GCCTGCTGCT GGCCTGCGGT
GCGCTCGCCT CGAGCTACGA CTTCCATTAC AACCGCTTCC TCTTCGAGCA CTTCCCCGAA
GGCACCGCCT TCCCCGCCAT CGAGCCCCCC GTGCTGCCGA CCGCGCTGCC GCGTGCCGAG
GTTGCCGCAT TCTCGATCGA CGACGCCTCC ACCACCGAGA TCGACGACGC CTTCTCGGTG
ACGCCGCGCG CCGAGGGCGG CTGGCGCATC GGCATCCACA TCGCCGCACC CGCGCTCGGC
TTCGCGCGCG GCTCGACGCT CGACGCGGTC GCGCGCCGGC GCCTGTCCAC CGTCTACATG
CCGGGCAACA AGATCACCAT GCTGCCCGAC GAGATCGTGC AGACCTTCAC CCTCGGCGAG
GGCCGCGACT GTCCGGCGGT GTCGCTCTAC CTCGACATCA CCCCGGGGCT GGCGATCGTC
CATCAGGAGA GCCGGGTCGA ACTCGTGCCG ATCGTGGCCA ACCTGCGCCA CCACGACATC
GAGCCGGTGT TCAACGACGA CACCGTCCAC AACGGCGGCC CCGACTTCCA GTGGAAGCGC
GAGCTGACCC TGCTGTGGGA CCTCGCCACC GTGCTCGAGG CTGGACGCGG CAAGGCCGCC
GGCAACGAGG ACCGCATCGA CTTCGGCTTC AGCGTGGACT GGACCGAGGA GACCGCGGAC
GGCCCGGGAC GCGTCAGCAT CGGCCGGCGC CTGCGCGGCT CGCCGATGGA CAAGCTCGTC
GCCGAGCTGA TGATCCACGC CAACATGACC TGGGGAAAGC TGCTCGATAC CTCGGGCATC
CCCGGCCTGT ATCGCGCCCA GGGCGGCGGC AAGGTGCGCA TGACCACGGT CGCCGCGCCG
CACGAAGGCC TCGGGGTGGA CTGCTACGCG TGGTCGAGCT CGCCGCTGCG GCGCTACGTC
GACTTGGTGA ACCAGTGGCA GATCATCTCG GTGCTGCAGG GCACCCCGCC CGCGTTCGCG
CCCAAGTCGG CCGAGCTGAT GGCGGCGATG CGCGACTTCG AGCTCACCTA CGCCGAGTAC
GCCGAGTTCC AGCGCGGCAT GGAGCGCTAC TGGTGCCTGC GCTGGCTGCG CCAGCACGGC
CGCGGCGAGG TCGAGGCCAC GGTGCTGCGC GAGAACGTGG TGCGCCTCGC CGAGATTCCG
CTGGTGATCC GCGTACCCTC GATGCCGCTG CAGATGCCCG GCAGCCGGGT CAAGCTCGTC
GTCGAGCGCA CCGACCTGCT CGACGTCGAG GTGGAGGCGC GCTTCGTACA GACGCTCGCC
GAACCCGATC CCGAGACGGT GGACGAGGCC GGCTTCGGTT TCGCGTGA
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| Protein sequence | MFVLYEEDGA FKAGTILADN DATLQVENTH GKRVKLKRAH VLMEFREPGP SDLLARAEAE
AEGLDVEFLW EVCGDDEFAF ADFAAEYHGH VPNAVESAAL LLRLHSAPIW FHRKGRGRFR
KAPADILQAA LAGLEKKRQQ AAAIEHMRAE LVAGRLPPEL AALLPQALYR PDRNRPEIKA
LEAACVDSGL SAARLLLACG ALASSYDFHY NRFLFEHFPE GTAFPAIEPP VLPTALPRAE
VAAFSIDDAS TTEIDDAFSV TPRAEGGWRI GIHIAAPALG FARGSTLDAV ARRRLSTVYM
PGNKITMLPD EIVQTFTLGE GRDCPAVSLY LDITPGLAIV HQESRVELVP IVANLRHHDI
EPVFNDDTVH NGGPDFQWKR ELTLLWDLAT VLEAGRGKAA GNEDRIDFGF SVDWTEETAD
GPGRVSIGRR LRGSPMDKLV AELMIHANMT WGKLLDTSGI PGLYRAQGGG KVRMTTVAAP
HEGLGVDCYA WSSSPLRRYV DLVNQWQIIS VLQGTPPAFA PKSAELMAAM RDFELTYAEY
AEFQRGMERY WCLRWLRQHG RGEVEATVLR ENVVRLAEIP LVIRVPSMPL QMPGSRVKLV
VERTDLLDVE VEARFVQTLA EPDPETVDEA GFGFA
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