| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3624 |
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| Symbol | |
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| ID | 7873129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 3981170 |
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| End bp | 3982885 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643700564 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002890594 |
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| Protein GI | 237654280 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCC AGCTCGCCCG CATCGCCCGC TCCCTCTGCC TGGCCTTCGC GCTCGGCGCC
GGCGGGGTCG CGACGGCGGC CAGCGGCGAG GCCGGCGAGG GCAACCTGCC CGCGCAGGAA
CTCACTCCGC GCACGCTGTA CCACTTCCTG CTCGCCGAGA TCGCCGGCGC GCGCGGCCAG
ATCGGCCTGT CGGCACAGCT CTATCTCGAC CTCGCGCGCA GCACGCGCGA CCCGCGCATC
GCCCGCCGCG CCACCGAGAT CGCGATGTAC TCGCGCAACC TCGTGATGGC GCGCGGCGCC
GCGGAGATCT GGACCGAGGT CGCCCCCGAC TCGGACGAGG CGCGCCGGGT ACTCGCCGGG
CTGAGCGGCG CCGGCCGCGG CGAGGACATC AACCTCGAGG CCATCCAGTT CCAGCTCGCG
CGCGTGCTCG CGCAATCGAA CGGCCGCCTC GCGCAGAACC TGCTGAGCCT CGGCCATACC
CTCGCCCGCG TACCCGACAA ACAGGCGGTG CGCGGCATCG TGATGCGCCT GACCGAACCC
TACGTCGACA TGCCCGAGGC GCACATCGCC CGCGCGCAGG CGGCACAGGC GGTCGAGGAC
AGGATGGGCG CGCTCGCTGC GGTGGATCGC GCCCTCGAGC TGCGCAGCGG CTGGGAACCC
GCGGTGCTGC TGAAGGTGCA GATCCTCCAG CAGGCAGGCG CGCACACGGA GGCCCTGCGC
GTGCTCGAGG CCGAGGCCGC GCGCGCGCCG GCGAGCCGGT CGCTGCGCCT GGCGAAGGCG
CGTGCGCTGG TGAGCGCGCA GCGCTTCGGC GAGGCACGCG CGGCCTTCAA CCAGTTGCTC
GAAGCCTCGC CGCAGGATCC CGAACTGCTC TATGCGGTGG GCCTGCTGTC GATGCAGCTC
GAGGACTTCG CCGCGGCCGA GCTGCACTTC GCACGCGCGC TCGCCGCGGA GCACCCGCAA
CCCGACCTCA TCCGCCTTCA CCTGGGCCAG ATCGCCGCCG ACCGCGGCGA GGGCGAGCGC
GCACGCAAGT GGTTCGGCGA GATCGAGAGC GAGGACCTCC GTCCCGAGGC GGACATCCGC
AGCGCCCTGA GCCTCGCGCA CGAAGGACGC ATCGAGGAGG CGCGCGCCCT GTTACGCAAC
GACGTCGAGG ATCCCGACCT CGCCCGCCGC TACCTGCTCG CCGAGGCGCA GATCCTGCGC
GACGCCGAGC GTCCGACCGA GGCCCTCGCG CTGCTCGATG CCGCCCTGCG CGAGAACCCC
GAAGACACCG GCCTGCTCTA CGAGGCCGCC ATGCTCGCCG AGCGCATCGG TCGCATGGAC
CTGCTCGAAG CGCGCCTGCG CCGCGTGCTC GAGCTGCAGC CCGATCATGC GCATGCGCTC
AACGCGCTCG GTTATTCGCT CGCCGACCGC GGCCTGCGCC TGGACGAAGC CGAGGCGCTG
ATCGCACGCG CGCATGCGCT CATGCCGCAA GACCCCTTCA TTCTCGACAG CCTCGGCTGG
GTGCGCTTCC GCCGCGGCGA TCAGGTCGGC GCGCTCGTCC ACCTGGAGCG CGCCTATGGC
ATGCGCAAGG ACGCCGAGAT CGCCGCCCAC CTCGGCGAGG TGCTATGGAC ACTCGGCCGT
CGGGACGAGG CCCGACGGAT CTTCGCCGAG GCGCTCGCAG CCCACCCCGA CAACCGTCTG
CTGACGGACA CCGGCCGCCG ACTGGGCATC CAGTGA
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| Protein sequence | MKTQLARIAR SLCLAFALGA GGVATAASGE AGEGNLPAQE LTPRTLYHFL LAEIAGARGQ
IGLSAQLYLD LARSTRDPRI ARRATEIAMY SRNLVMARGA AEIWTEVAPD SDEARRVLAG
LSGAGRGEDI NLEAIQFQLA RVLAQSNGRL AQNLLSLGHT LARVPDKQAV RGIVMRLTEP
YVDMPEAHIA RAQAAQAVED RMGALAAVDR ALELRSGWEP AVLLKVQILQ QAGAHTEALR
VLEAEAARAP ASRSLRLAKA RALVSAQRFG EARAAFNQLL EASPQDPELL YAVGLLSMQL
EDFAAAELHF ARALAAEHPQ PDLIRLHLGQ IAADRGEGER ARKWFGEIES EDLRPEADIR
SALSLAHEGR IEEARALLRN DVEDPDLARR YLLAEAQILR DAERPTEALA LLDAALRENP
EDTGLLYEAA MLAERIGRMD LLEARLRRVL ELQPDHAHAL NALGYSLADR GLRLDEAEAL
IARAHALMPQ DPFILDSLGW VRFRRGDQVG ALVHLERAYG MRKDAEIAAH LGEVLWTLGR
RDEARRIFAE ALAAHPDNRL LTDTGRRLGI Q
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