Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_3618 |
Symbol | |
ID | 7873123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 3975238 |
End bp | 3976641 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643700558 |
Product | peptidase M16 domain protein |
Protein accession | YP_002890588 |
Protein GI | 237654274 |
COG category | [R] General function prediction only |
COG ID | [COG0612] Predicted Zn-dependent peptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGCAG AAACCCCCAG CCTCGAGCGC TCCCCCACCC GCCCCCGCCG CCTCCATCTC CTGCGCACCG CCGCGTTCGT ACTTGGTGCC GGCGCGGCGG CCGGCGCGCT CGCCGCCCCC GAGATCGTCG AATGGACCGC GCCCACCGGC GCGCGGGTGC ACTTCGTCGA GAGCCGCGCG CTGCCGCTGG TCGACATCCA GATCTCCTTC GCTGCCGGCG GCGCGCTCGA CCCCGAAGGC AAGGCCGGGC TGGCGAGCAT GACCCAGGCC CTGCTCGACG CCGGCGCCGG CGGGCTCGAC GAGCAGACCA TCGCCGACCG CAAGGCCGAT CTCGGCATCG AGCTCTCCGG CGGCACCGAC AACGACCGCG CCAGCATGGC GCTGCGCAGC CTGTCCTCGC CCGCCGAGCT CGACGCCGCA GTCGAGCTCG CCGCCACCCT GCTCGCCCGC CCCGACTTTC CCGCCGCGGT GCTCGAGCGC GAGCGCAGCC GCGCGATCGC CGGCCTGCGC GAGGCGCTGA CCAAGCCCGC CACGCTCGCC GCGCGCCAGT TCAACGCCGC GCTCTACGCC GGCCACCCTT ATGGCCACGA CAGCACGCCG GAGTCGCTCG CCGCGATCGG GCGCGAGGAC CTGGTCGCCT TCCACCGCCT GCACTACGGC GCCAAGCGCG CCGCGGTGGC GATCGTCGGC GACGTGGACC GCGCCGCCGC CGAGCGCATC GCGATCCGCC TCACCGAAGG CTTGCCCGCA ACCGACGCCG CCGCGCCGCT GCCGACACCC GCGCCGACGA CGGCGCAGGT CTTCCGCATC CCGCACCCCT CGGCGCAGGC CCACATCCTC GTCGGCCAGC CCGGCATGGC GCGCGAGGAC GCCGACTACT TCCCCTTGCT GGTGGGCAAC TACGTGCTCG GCGGTGGCGG CTTCGTGTCG CGGCTGACCG CCGAGGTACG CGAGAAGCGC GGTTTTGCCT ACAGCGTGTA CAGCGCGCTG TCGCCACAGC AGGTCGCCGG CCCCTTCCAG ATCGGCCTGC AGACGCGCGG AAGCCAGGCC GAGGAAGCGC TCGCGGTGGT GCGGGCGACG CTCGCGGGCT TCCTCGCCGA CGGCCCCAGC GCCGAGGAGT TGCAGGCCGC CAAGGACAAC CTGATCAATG GCTTCGGCCT GCGTCTCGAC TCCAACGCCA AGCTGCTCGA CTACGTGTCG ATGATCGGCT TCTACCGCCT GCCGCTCGAC TGGCTGGAGC GCTACCCGCA GCAGGTCGCC GCGGTTGACG TCGCCGCGGT GCGCGCGGCC TGGCAACGCC GCATCCGCCC GGAACAGCTC GTCACCGTGA TCGCCGGCGG CGACGGCGAC CGTCCCGCGG CGGCGGGTGC GTCCACCACG CCCCCCGCGG AAGCCGCGCA GTGA
|
Protein sequence | MTAETPSLER SPTRPRRLHL LRTAAFVLGA GAAAGALAAP EIVEWTAPTG ARVHFVESRA LPLVDIQISF AAGGALDPEG KAGLASMTQA LLDAGAGGLD EQTIADRKAD LGIELSGGTD NDRASMALRS LSSPAELDAA VELAATLLAR PDFPAAVLER ERSRAIAGLR EALTKPATLA ARQFNAALYA GHPYGHDSTP ESLAAIGRED LVAFHRLHYG AKRAAVAIVG DVDRAAAERI AIRLTEGLPA TDAAAPLPTP APTTAQVFRI PHPSAQAHIL VGQPGMARED ADYFPLLVGN YVLGGGGFVS RLTAEVREKR GFAYSVYSAL SPQQVAGPFQ IGLQTRGSQA EEALAVVRAT LAGFLADGPS AEELQAAKDN LINGFGLRLD SNAKLLDYVS MIGFYRLPLD WLERYPQQVA AVDVAAVRAA WQRRIRPEQL VTVIAGGDGD RPAAAGASTT PPAEAAQ
|
| |