| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3609 |
|---|
| Symbol | |
|---|
| ID | 7873114 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 3962492 |
|---|
| End bp | 3964231 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 579 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643700549 |
|---|
| Product | gamma-glutamyltransferase |
|---|
| Protein accession | YP_002890579 |
|---|
| Protein GI | 237654265 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0405] Gamma-glutamyltransferase |
|---|
| TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.916734 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGGC AAACCCTCCT CGCCACCGCG CTCATGATGG CGGCGTTCGG CGCCCTGGCG
AAGCAGCCGG TCGACACCGG CCACGGCGGC GCGGTCGCCA CCATCTCGCA CGAGGCCAGC
CTGGCCGCGA TGCAGATCCT CGACGCCGGC GGCAACGCCA TCGACGCCGC GGTGGCCGCG
GCGGCCGCGC TCGGCGTCAC CGACCCGTTC AGCTGCGGCA TCGGCGGCGG CGGCTTCATG
CTGATCTACT CCGCGAAAGA CCGGCGCGTG ATCGCCATCG ACCACCGCGA GGTGGCCCCG
GCGAGCTTCC ACCCCGGCGT CTTCCTCGAC GCCGAGGGCA AGGAGCTGGA CTGGAAGGCC
ACCGTGCCCA ACGGCATCTC GGTCGGGGTG CCCGGCACCG TGCGCGGCTG GCACGAAGCG
CTGACGCGCT ACGGCACGAT GGGCTTCGAC AAGGTGCTCG CGCCCGCCAT CCGCGTGGCC
GAAGAAGGCT TCGCGGTCGG CCCCAACTTC CACCGCATCA ACAAGATCAA CGAGGCCAAG
TTCGCGCGCT TCTCCACCGC CTCGGCGCTC TACCTGCAGG ATGGCAAGGC GCTGCCGGTG
GGCACGCGTT TCCGCAACCC CGAGCTCGCG CAGACCTACC GCGACATCGC GCGCGGCGGG
GTGAAGGCCT TCTACGAGGG CGCGATCGCG GCGAGCATGG TGGCGGCGGT GAACCACCCG
CCGGTCACGC CCGGCACGAG CGTGATCGCC GGCGGCCTCA CCATGGCCGA CCTCAAGGAC
TACGAGGCGC GCATCCGTCC GCCGATACGT TCGACCTATC GCGGCTACGA GATCCACGGC
ATGCCCGCGC CCTCGAGCGG CGGCATCGCG ATCGCGCAGG CACTCAACCT GCTCGAGACC
TTCGACCTCG CCGGCAAGCC GCGCGCCGAG ATCGAGCACC TCTACCTCGA GGCCTCGCGC
CTGGCCTTCG CCGACCGCAA CGCCTACGTG GCCGACGAGG AGTTCGTGGA TGTGCCCAGG
GACGGCCTGC TGTCCAAGGC CTACGCGCGC GAGCGTGCGA AACAGATCGG CGCCGGCGCG
GCGCCGGGCA AGGTCGCGGC GGGCGATCCC TACCCCTTCG AGGACGACCG CTCGGTGCCG
CTGCGCCCGC AGCCGAAGCC GCTCGCGCAG GAGTCGATGC ATACCACCCA CCTCACGGTG
TCCGACCGCG AGGGCAACGT GGTCGCCTAC ACCTTCACCA TCGAGGACTG GGGCGGCAGC
GGCATCGTGG TGCCGGGGCG CGGCTTCCTG CTCAACAACG AGCTCACCGA CTTCGACTTC
AGCGGCCCCC ACCCCAACCT GCCCGAGGCC TTCAAGCGCC CGCGCTCGAG CATGAGCCCG
ACCATCGTGC TGAAGGACGG TGCGCCCGCG TTCACGATCG GCTCGCCCGG CGGCTCGACC
ATCATCACCA CCGCGCTGCA GACCATCGTC AATCACGTCG ACCTGGGCAT GAGCCTGGCC
GACGCGCTCG CCGCCCCGCG CATGAGCCAG CGCAACGGCG AGACGACCCT GGTCGAGACC
CTGCTTGGCT TCCCGGGCAG CGAGCAGGCC AAGGCGCTGG AGGCGAAGGG CCACAAGTGG
CGCGAGACCG ACCAGATCGG CGCCGCCAAC GCCATCCGCT TCAACCCCGA CGGCACGGTG
ACCGCGGTCA GCGAGCCGCT GCGCCACGGC GGCGGCAGCG CGATCGTGCA GAAGCAGTGA
|
|---|
| Protein sequence | MKRQTLLATA LMMAAFGALA KQPVDTGHGG AVATISHEAS LAAMQILDAG GNAIDAAVAA
AAALGVTDPF SCGIGGGGFM LIYSAKDRRV IAIDHREVAP ASFHPGVFLD AEGKELDWKA
TVPNGISVGV PGTVRGWHEA LTRYGTMGFD KVLAPAIRVA EEGFAVGPNF HRINKINEAK
FARFSTASAL YLQDGKALPV GTRFRNPELA QTYRDIARGG VKAFYEGAIA ASMVAAVNHP
PVTPGTSVIA GGLTMADLKD YEARIRPPIR STYRGYEIHG MPAPSSGGIA IAQALNLLET
FDLAGKPRAE IEHLYLEASR LAFADRNAYV ADEEFVDVPR DGLLSKAYAR ERAKQIGAGA
APGKVAAGDP YPFEDDRSVP LRPQPKPLAQ ESMHTTHLTV SDREGNVVAY TFTIEDWGGS
GIVVPGRGFL LNNELTDFDF SGPHPNLPEA FKRPRSSMSP TIVLKDGAPA FTIGSPGGST
IITTALQTIV NHVDLGMSLA DALAAPRMSQ RNGETTLVET LLGFPGSEQA KALEAKGHKW
RETDQIGAAN AIRFNPDGTV TAVSEPLRHG GGSAIVQKQ
|
|---|
| |