Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_3564 |
Symbol | |
ID | 7873070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 3909137 |
End bp | 3910009 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643700505 |
Product | Peptidase M23 |
Protein accession | YP_002890535 |
Protein GI | 237654221 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0822552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCGCT CGTTCCCTTC GTGCGGGTGG CGTATACGCC TTGCCCGCGT TCGCCTTGCC CGCGTTCTGG CCGCTGCGGC GGCCTGCGTT GCCCTGCCGG TCGCGGCGTT GGAACTGCCG CGCGAGCGCG CGGTGGCGGG CGGGGTCGCC CTGGTCGAAC TCGGACCCGC ACTGGTCGCG CCCCAGGCCA GCCTGGACGG CGTGCCGGTG CTGGTCGCCG GGCGCCCGGG CGGGTGGACC GCGGTGGTGG GCATTGCGCT CGAAGCCGAG CCGGGCAGCG TGGACCTGGA GGTGCGCGCG GAAGGCGAGC CGCCGCGCCG GGTGCCGGTC GCGGTGGGGC CGGTGCGCTA CGCCGAGCAG CGCCTGAAGG TGGCGCCGGG CAAGGTCGAC CTGTCGCCCG CCGACCTCGC CCGCCACGAG CGCGAGCGCC TGCGCTCGGC CGAGATCGTC GCCACCTGGA GCACGCTCGA TCCCGGCAGC CTGCGCATGC TGCAGCCGGT ACCGGGGCGG CGCTCGGGCT CCTTCGGGCT GCGCCGGGTG TTCAACGACC AGCCGCGCAA GCCGCATGGC GGCATGGACA TCGCCGCGCC CACGGGCACC CCGGTGGTGG CCGCCGCGGC GGGCCGGGTG ATCGACACCG GCGACTACTT CTTCAACGGC AACACGGTAT GGCTCGACCA TGGCCGCGGC CTGCTCACCA TGTATTGCCA CCTGTCCTCG ATCGCGGTGA AGGCGGGCGA CACGGTGAAG GCCGGCGCAC GCATCGGCGC GGTGGGCGCC ACCGGGCGCG TCACCGGCCC GCACCTGCAC TGGTCGGTGA TGCTCAACCG CAGCATGGTC GACCCGGCGC TCTTTCTGCC CGGCGGCGGC TAG
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Protein sequence | MMRSFPSCGW RIRLARVRLA RVLAAAAACV ALPVAALELP RERAVAGGVA LVELGPALVA PQASLDGVPV LVAGRPGGWT AVVGIALEAE PGSVDLEVRA EGEPPRRVPV AVGPVRYAEQ RLKVAPGKVD LSPADLARHE RERLRSAEIV ATWSTLDPGS LRMLQPVPGR RSGSFGLRRV FNDQPRKPHG GMDIAAPTGT PVVAAAAGRV IDTGDYFFNG NTVWLDHGRG LLTMYCHLSS IAVKAGDTVK AGARIGAVGA TGRVTGPHLH WSVMLNRSMV DPALFLPGGG
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