Gene Tmz1t_3553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3553 
Symbol 
ID7873059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand- 
Start bp3894026 
End bp3894658 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content74% 
IMG OID643700494 
Producthypothetical protein 
Protein accessionYP_002890524 
Protein GI237654210 
COG category[S] Function unknown 
COG ID[COG3222] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.537147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCACGA CCCGTATCGT GGTGATCGCC AAGGCGCCGC AGCCGGGGCG GGTGAAGACG 
CGCCTGATCC CGGCGCTCGG TGCGGAAGGA GCCGCGGCGC TGGCTGCCCG CATGCTGGCG 
TGCACGCTGG CGGTGGCTTT CGAGGCCGCC GGGGCTGCCG ATACCGCCGA TCCAGCGCTC 
GGCGTGGTCG AGCTGTGCGC CAGCCCCGCC CCGGGCGATC CGGCCTGGCA GGGCGTCGTG 
GTCCCGGCAG GCCTGCGCTG GTCCGCGCAG GGCGAGGGCG ATCTCGGCGC ACGCATGGCG 
GGCGCGGCGC GGCGGGTGCT TGCCGGCGGC GAGCGCGTGC TGCTGATCGG CACCGACTGC 
CCGGCGCTCG ACGCAGCCTG CCTGCGCACC GCGGCCGAGG CGCTCGACGA GGTCGAGGCG 
GTGATCGTGC CGAGCTTCGA CGGCGGCTAC GTGCTTCTCG GCCTGCGCCG CTTCGACCCG 
AGCCTGTTCG AGGGCATCGC CTGGAGTACA TCGACGGTCG CGGCGGCGAC CCGGGTGCGC 
CTCGATGCGC TGGCGTGGTC GTATCAGGTG TTGCCCGCGC TGCAAGACAT CGACGTCCCG 
GCCGACCTCG TCCATCTTCC ATCCGCCGGA TGA
 
Protein sequence
MSTTRIVVIA KAPQPGRVKT RLIPALGAEG AAALAARMLA CTLAVAFEAA GAADTADPAL 
GVVELCASPA PGDPAWQGVV VPAGLRWSAQ GEGDLGARMA GAARRVLAGG ERVLLIGTDC 
PALDAACLRT AAEALDEVEA VIVPSFDGGY VLLGLRRFDP SLFEGIAWST STVAAATRVR 
LDALAWSYQV LPALQDIDVP ADLVHLPSAG