Gene Tmz1t_3552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3552 
Symbol 
ID7873058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3893482 
End bp3893943 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content69% 
IMG OID643700493 
Productconserved hypothetical membrane spanning protein 
Protein accessionYP_002890523 
Protein GI237654209 
COG category[S] Function unknown 
COG ID[COG5615] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.137543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTCC ATCCGCTGCT GCTTTTCGTG CACGTCGCCG GCGTCGTCGT CTGGGTGGGC 
GGGATGTTCT TCGCCTACGT CTGCCTGCGT CCCGAGGCCG CCAGCCAGCT CGAGCCACCG
CCGCGCTTGC GGCTGTGGCG CGGGGTGCTG GCGCGCTTCT TCACCTGGGT GTGGGTTGCG
GTGGCTGCGG TGCTGGCGAG CGGGTTGGCG TTGCTGCTGC GCATCGGCTT CGCGGCGGCG
CCGCCGCACC AGCACCTCAT GTTGCTGATG GGCCTGGTGA TGATCGCGAT CTATGTGTTC
GTCTATTCCG TGCCCTACGC AGCCCTGAGC AAGGCGGTCG CGGCCGAGGA GTGGAAGGCG
GGCGGTGCGG CGCTCGGGCG CATCCGGCAG CTGGTGGGGA CGAACCTGAC GCTCGGCTTC
CTCACCATCG CCATGGGTAC GATCGGGCGC TGGCTGGGCT GA
 
Protein sequence
MDFHPLLLFV HVAGVVVWVG GMFFAYVCLR PEAASQLEPP PRLRLWRGVL ARFFTWVWVA 
VAAVLASGLA LLLRIGFAAA PPHQHLMLLM GLVMIAIYVF VYSVPYAALS KAVAAEEWKA
GGAALGRIRQ LVGTNLTLGF LTIAMGTIGR WLG