| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3546 |
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| Symbol | |
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| ID | 7873052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 3886489 |
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| End bp | 3887232 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 643700487 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002890517 |
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| Protein GI | 237654203 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.677675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGCG GTACGAGCGA GGCGGCGCGC GCCGAGGTGC GCATGGAGGA AGCCGGCGGC
AGGACGCTCG CCGTGGTCGT GGGCGGCGGC GGTGGGGTGG GCGCGGCCGT GGTCGCCGCG
TTGCGCGAGG CGGGTGGCCA CGACGAGGTC CTTGCCCTCG GGCGCCGGAG CAGCCCCGCG
CTCGATCTGC TCGAAGAGGC CTCGATCGCC GCTGCGGCCG CCGCGGTGCG TGCGCGCGGC
GTGCCGACCC TGGTCTTCGA CGCCACCGGT TTCCTGCACG GCGCGGGCAT GGAGCCGGAG
AAGAGCTGGC GCGAGCTCGA TGCGGCCCAC CTGGCGCACG CGTTCGCGAT CAACGCGATC
GGCCCGGCCC TGCTGATGAA GCATTTCCTG CCGCTGCTGC CGCGCGACCG CCGCGCGGTG
TTCGCCACGC TGTCGGCGCG CGTGGGCAGC ATCGGTGACA ATCGGCTCGG CGGCTGGTAC
GCCTACCGCG CCTCGAAGGC GGCGCTCAAC CAGCTGGTGC GCACCGCCGC GGTCGAGCTG
CGCCGCAGCC GGCCGCAGGC GATCTGCGTG GCGCTGCATC CGGGCACGGT CGACACCGGG
CTGTCGGCGC CCTTCGCCAA GTCCGGGCTG CAGGTGCAGG CCCCCGCCGA GGCGGCGGCG
CGCCTGCTCG CGGTGATCGA GGGCCTCGGG CCGGGCGACT CGGGCGAATT CTTCGACCAT
CGCGGCGAAC CCGTGCCGTG GTGA
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| Protein sequence | MSGGTSEAAR AEVRMEEAGG RTLAVVVGGG GGVGAAVVAA LREAGGHDEV LALGRRSSPA
LDLLEEASIA AAAAAVRARG VPTLVFDATG FLHGAGMEPE KSWRELDAAH LAHAFAINAI
GPALLMKHFL PLLPRDRRAV FATLSARVGS IGDNRLGGWY AYRASKAALN QLVRTAAVEL
RRSRPQAICV ALHPGTVDTG LSAPFAKSGL QVQAPAEAAA RLLAVIEGLG PGDSGEFFDH
RGEPVPW
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