| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3523 |
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| Symbol | |
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| ID | 7873029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 3858673 |
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| End bp | 3859989 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643700464 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002890494 |
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| Protein GI | 237654180 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.51854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAAG ACAAGCCCTC CAACCGAACC GCCCGCCCGC GCTGGGGACG CCGCGCCCTG
CTGATCCTGG TGCCGCTGCT GCTCGCCGGC GCCTGGTACG GTCGCAGCGC CTTCATCGGT
GAGCGCGACC CCACCACCAA CTACCAGTTC ACCACCGTGC AGCGCGGCGA CGTCGAGGAC
GTCGTCACCG CCACCGGCAC CCTGCAGCCG CGCGACTATG TGGACGTGGG CGCGCAGGTC
TCCGGTCAGT TGCGCAAGAT CCACGTCGAG GTCGGCGACA CGGTCGAGGC CGGCCAGCTG
CTCGCGGAGA TCGACCCCAC GGTCTATCGT GCCCGCGTCG ACGCCTCACG CGCCCAGTTG
AAGAACCTGC GTGCGCAGCT GAAGGACCGC GAGGCCCAGC TCGCCCTCGC GCAGATCCAG
CAGCGCCGCC AGCGCGCGCT GATGGCCGAG GACGCCACCA CCAAGGAGAG CCTGCAGACC
GCCGAAGCCT CGGCGATGTC GGCGGAGGCT CAGCTCGAGG CGCTGCGCGC GCAGATCGAG
CAGATCGAAT CGACCCTGCG CGCCGACGAG GCCAACCTGC AATACGCCCG CATCCTGTCG
CCGATGGCCG GCACCGTGGT GTCGATCACT GCGCGCCAGG GCCAGACGCT CAACACCAAC
CAGCAGGCAC CGGTGGTGAT GCGCATCGCC GACCTGTCCA CGATGACCGT GCAGACCCAG
GTATCGGAAG CCGACATCGG CCGCCTGAAG CTCGGCATGG AGGCCTACTT CACCACCCTG
GGCGGCAGCG GCAAGCGCTG GCAGGGCAAG CTCGAGAAGA TCGAACCCAC GCCCACGGTG
ACCAACAACG TGGTGCTCTA CAACGCGCTC TTCGACGTCC TCAATCCCGA CGGCCGGCTG
ATGACGCAGA TGACCGCACA GGTCTTCTTC GTGGTCGCGC AGGCCAAGGA TGCGCTGCTG
ATCCCGATGG CCGCACTCGC CCAGGGCCAG GCGCGCCCGC CCCAGGCAGG GGCCGGCCCC
GCCCCCGCAG CCCCGCCCGG CGCCGGGGCG CCCGCAGGCA ATGGCATGGG CTCGGGGCGC
GGCATGATGA GCCAGGGGCG CGGCGCAGCG TCGGGCACCT CCGGCGCCGG ACCGCGCCAG
GGTACGGTGC GGGTCGCCGA TGCACGCGGC GCGCTGGAAG AACGCAAGGT CGAGCTCGGC
GTCTCCAACC GCGTGCAGGC ACAGGTGCTG TCCGGGCTGG CCGAGGGCGA ACGCGTCGTC
TCCGGGCTGG TGGTCGGAAA CGGCGCCGGT CGCCCGCAGA TGACGCCGCG GCTATGA
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| Protein sequence | MNEDKPSNRT ARPRWGRRAL LILVPLLLAG AWYGRSAFIG ERDPTTNYQF TTVQRGDVED
VVTATGTLQP RDYVDVGAQV SGQLRKIHVE VGDTVEAGQL LAEIDPTVYR ARVDASRAQL
KNLRAQLKDR EAQLALAQIQ QRRQRALMAE DATTKESLQT AEASAMSAEA QLEALRAQIE
QIESTLRADE ANLQYARILS PMAGTVVSIT ARQGQTLNTN QQAPVVMRIA DLSTMTVQTQ
VSEADIGRLK LGMEAYFTTL GGSGKRWQGK LEKIEPTPTV TNNVVLYNAL FDVLNPDGRL
MTQMTAQVFF VVAQAKDALL IPMAALAQGQ ARPPQAGAGP APAAPPGAGA PAGNGMGSGR
GMMSQGRGAA SGTSGAGPRQ GTVRVADARG ALEERKVELG VSNRVQAQVL SGLAEGERVV
SGLVVGNGAG RPQMTPRL
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