| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3512 |
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| Symbol | |
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| ID | 7873018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 3849433 |
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| End bp | 3851898 |
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| Gene Length | 2466 bp |
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| Protein Length | 821 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643700453 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002890483 |
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| Protein GI | 237654169 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGCCCG AAACATCGCC GAGCTCGTTC GCCCTCCGCC CCTCGTCGAT CCGCATCCGC
CTGTTGCTCG CGAGTACGGT GGTGCAGGTG GTGTTGCTGA GCATGTTGCT CGCGAACAGC
GTGCGGCTGA TGAACAACGC ACTGTCGGCG AGCCTGGAGA CGACGATCGG TCAGACCGCG
AGCATGCTGC ACGCGATGGC CACCGCCTAC GGCGAGCAGG GCCGGCTCGA CGGGCTCGAG
GACGTGCTCG GCGAGCTTCT TGCCGACGCC GACGAAGGCC TGCTCTATGT GCGCATCCGC
GACGCGCGCG GTCATCTGCT GGTGAGCGCC GGCATGCCCG GGCTGGAGCA GGTGCCGGAG
CCGGACGAAC AACGCCACCG TTTCTTCGAG ACCCTGCTCG CCGACGACCT CGTGCATGTG
CGCCGGCAAC TGCTGCTGCC GCGCAACCAG GTCGGCGTGC TGCAGTTCGG AGTCTCGGTC
TCGGTACTCG CCGCGGCCCG CGAGGCGATC ATGCAGCAAG GCCTGGCGAT CGCGATCGCG
GAGATCCTGC TCACCTTCGT CCTGCTCTCC TCGCTCGGCT ATCTGCTCAC CCGCAACCTG
CGCCTGCTGC TGGAGGGCAG TCGTGCGATC GCCAACGGCT TCCTCGCGCA CCGCGTCGAG
TCGCGTGGCA AGGACGAGCT GGCGGTGATC GCCAACCACT TCAACCTGAT GGCCGAGGCG
CTGCAGAACC GGATCGCCGA GCTGCAGGAT ACGGCGGTGC GCCTGCGGGC GAGCGAGGAG
CGCCATGCCC TGGCCCTGCG CGGGTCCAAC GACGGCCTGT GGGACTGGGA CATCGACGCC
GACGACGTCT ATTACTCCGA GCGCTTCTGC CAGATCCTCG GGGTCCAGCC GGGAACCCTG
TCGAACCGGC CGGAGGACAT GCTCGCCTAC CTCCACCCCT ACGAGCGCGA CGCCTACCGC
CAGCGCCTGG TCGAACACCT CAAGGGCGAC AGCAACCATT TCATCATGGA ACTGCGCGTC
CGCCTGCCCG ACGGCGCCTA CCGCTGGGTG CTGATGCGCG GAGTCGCCGA TCGCGACGAG
AACCTGCATG CCTACCGCAT GGCTGGTTCG CTCGGCGACA TCGACCTGCG CAAGCGCGCC
GAACAGCAGC TGGTGCACGA TGCCTTGCAC GACGGACTCA CCGGCCTGCC CAACCGGGCA
ATGTTCATCG AGCACGCCAA CCGCGCGCTT GCCCAGCGCC GGCGCGGGGA CCTCACCCAG
ATCGCGATCC TGGCGATCAA CCTGGAGCGC TTCAGCCTGG TCAACGACAG CTACGGGCAC
CTCGTGGGCG ACGAACTGCT GCGCCGGATC GGTGCCCACA TCGCGGCCCT GATGCGCGAT
GGCGACGTGT GCGCGCGGGT GGGGGGTGAC CAGTTCGCGG TGCTGCTCAA CGGTGTGGAG
AGCTCGATCG ACGCGCTGCG CATCTGCGAG CAGCTGGTCG CGCTGCCGGC CTTCGCACCC
GACGACGACG GTCAGCAACT GCACCCGCGC TGCCGGGTGG GCGTCGCCAT CAGCGACAAC
GAGCGCGAGG ATGCCGAATC GCTGCTGCGC GATGCCGACA ACGCACTGCA CAAGGCCCGT
CGCAGCGAGC GGGGGCCGAT CGAATTCTTC CACACCGAGA TGCACGCCGC CGCGGTGCGC
GCGCTGCAGG TCGAGGCCGA ACTGCGCAAG GCGCTCACCC AGGGCGGGCT GCAGGTGTGG
TACCAGCCCA TCGTCGAGCT CGCGAACCTG CGTACGACCA GCTTCGAGGC CCTGGTGCGC
TGGCCGCACC CGACGCTCGG CCTGCTCTCG CCGGGTGAGT TCATCCCGCT CGCCGAGGCG
CTCGACCTGA TCCACGACAT CGGCACGCTG GTGCTCGAGC GCGTGTGCGC CGACCTGCGC
GAATGGGCGG GCCGGCTGCC GGCCGACGCG CCGCTGCGCG TCAGCGTGAA CCTGTCCGCG
CGCCAGCTCG CACGCCCGGA TCTCGCCGCC GAACTGCTCG CCGCCATCGA CCGTGTCGGC
GTGGCGCGCG AACGCATCCG CTTCGAGGTC ACGGAGAGCG TGCTCGCCCA TCCGGACGGC
CCGGCGATCG ACCACCTCCA TGCCCTGCGC GCCGCCGGAC TCGACATCCT CATCGACGAC
TTCGGCACCG GCTACTCGAC GCTGAGCTAC CTGCACACGA TGCCGTGCAA CCAGGTCAAG
CTCGACGGCT CCTTCGTGCG CTCGCTGCCG TACGACCAGC GCCTGCGCGC GATCGTGCGG
CACAGCATCG AACTCGCCCA CGACCTCGGC ATGACCGTCG TCGCCGAGTG CATCGAGGAT
GAGGCCCAGC TCGAGATCCT GCGCGCGATG GGCTGCGACT TCGGACAGGG CTACCTGTTC
TCGCGGCCGC TCGACCGCGA CGCCACCTTC AACCGCTTGC ACAATCCCGC TCCGGAGCGC
CGATGA
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| Protein sequence | MPPETSPSSF ALRPSSIRIR LLLASTVVQV VLLSMLLANS VRLMNNALSA SLETTIGQTA
SMLHAMATAY GEQGRLDGLE DVLGELLADA DEGLLYVRIR DARGHLLVSA GMPGLEQVPE
PDEQRHRFFE TLLADDLVHV RRQLLLPRNQ VGVLQFGVSV SVLAAAREAI MQQGLAIAIA
EILLTFVLLS SLGYLLTRNL RLLLEGSRAI ANGFLAHRVE SRGKDELAVI ANHFNLMAEA
LQNRIAELQD TAVRLRASEE RHALALRGSN DGLWDWDIDA DDVYYSERFC QILGVQPGTL
SNRPEDMLAY LHPYERDAYR QRLVEHLKGD SNHFIMELRV RLPDGAYRWV LMRGVADRDE
NLHAYRMAGS LGDIDLRKRA EQQLVHDALH DGLTGLPNRA MFIEHANRAL AQRRRGDLTQ
IAILAINLER FSLVNDSYGH LVGDELLRRI GAHIAALMRD GDVCARVGGD QFAVLLNGVE
SSIDALRICE QLVALPAFAP DDDGQQLHPR CRVGVAISDN EREDAESLLR DADNALHKAR
RSERGPIEFF HTEMHAAAVR ALQVEAELRK ALTQGGLQVW YQPIVELANL RTTSFEALVR
WPHPTLGLLS PGEFIPLAEA LDLIHDIGTL VLERVCADLR EWAGRLPADA PLRVSVNLSA
RQLARPDLAA ELLAAIDRVG VARERIRFEV TESVLAHPDG PAIDHLHALR AAGLDILIDD
FGTGYSTLSY LHTMPCNQVK LDGSFVRSLP YDQRLRAIVR HSIELAHDLG MTVVAECIED
EAQLEILRAM GCDFGQGYLF SRPLDRDATF NRLHNPAPER R
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