Gene Tmz1t_3503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3503 
Symbol 
ID7873009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3840124 
End bp3841287 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content74% 
IMG OID643700443 
Producthistidine kinase 
Protein accessionYP_002890474 
Protein GI237654160 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCTGC CGACACCACG CGACCGCCTT CCCGACCGCG CCCCGCTGCG CAATTACCTG 
CTCGCTGCGC TGGCGGCGGG TGCGGTGGCG CTGGTCGGTG CGCCGCTGCT CGGGCAGTTC
GATCTCGCCA ACATCGCCAT GCTGTTCCCG CTCGCGGTGC TGTTCGCAGC GATCCGGCTC
GGTCGCGGGC CGGCCGTGTT CGCCGCCTTC CTGGCGGTGG CGCTGTTCGA CTTCTTCTTC
GTGCATCCGC ACTTCACGCT GGCGGTCTCG GACCTGCAGT ACCTGCTGAC CTTCGCCGTG
CTGCTCGCGG TGGCACTGAC CACCGCGGAG CTGGCCGCGC GCCTGCGCCG CGAACGCGAC
TCTGCCGAGG CGCGTGCGGA AGAGGCGGCA CAGGCGCGCC TCGCCGCCGA CACCGAGCGC
CTGCGCAACA CCTTGCTCGC CTCGCTGTCG CACGACCTGC GCACGCCGCT GACCGCACTC
GCCGGACTCG CCGAGTCGCT CCCGCTGGCC GGACCGCCGC TGCCCCCGGC GCAGGCCGAG
CTGGCCGAGG CGATCCGCGC CGAGGCCTTG CGCACCCATG CGCTCGCGCG CGACCTGCTC
GACCTCTCCC GCCTGCAATC CGGGGCGCCG CGCCTCGCGC TCGACTGGCT GGCGGTGGAC
GAGCTGCTCG GCAGCGCGCT GCAGGCGCGC GCCCACGCCC TGCGCGCGCA CGTGTTCGCG
CTCGAGCTGC CCGAGGAACT GCCACTGCTG CACGCCGACG CGGTGCTGAT GGAGCGGGTG
GTGTGCAACC TGCTCGACAA CGCGATCGCG CACACCCCGG AGGGAGGGCA CATCGTGCTG
GCGGCGCAGG TGGGCGCCGA CTGGATCCGC ATCAGTCTGT GCGACGACGG TTGCGGCCTG
CCGCCGGGGC GCGAGCAGGC GATCTTCGAG CGCTTCGTGC GCGCCCCCCA TCCGCGCGGC
GCGGCCGACG CAACGACGGC GACCGGCGAT GCCGGCACCG GGCTGGGTCT GGCGATCGTG
CACGCCATCG TCGCGGCACA CGGCGGCAGC GTGAGCGCAC ACAACCGCGC CGGCGGCGGC
GCCTGCTTCG TGCTGCAGCT GCCGCTGCCA CGCCAGCCGG ACCGACCGCC TCCCGAGGAC
GAGGCCGGAG CGCCCCCACG ATGA
 
Protein sequence
MALPTPRDRL PDRAPLRNYL LAALAAGAVA LVGAPLLGQF DLANIAMLFP LAVLFAAIRL 
GRGPAVFAAF LAVALFDFFF VHPHFTLAVS DLQYLLTFAV LLAVALTTAE LAARLRRERD
SAEARAEEAA QARLAADTER LRNTLLASLS HDLRTPLTAL AGLAESLPLA GPPLPPAQAE
LAEAIRAEAL RTHALARDLL DLSRLQSGAP RLALDWLAVD ELLGSALQAR AHALRAHVFA
LELPEELPLL HADAVLMERV VCNLLDNAIA HTPEGGHIVL AAQVGADWIR ISLCDDGCGL
PPGREQAIFE RFVRAPHPRG AADATTATGD AGTGLGLAIV HAIVAAHGGS VSAHNRAGGG
ACFVLQLPLP RQPDRPPPED EAGAPPR