| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3478 |
|---|
| Symbol | |
|---|
| ID | 7872984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 3812186 |
|---|
| End bp | 3813394 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643700418 |
|---|
| Product | protein of unknown function DUF214 |
|---|
| Protein accession | YP_002890449 |
|---|
| Protein GI | 237654135 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCCG CCGACACCCT GCGCTTCGCC ACCCGCGCCG CCACCGCGTG GCCGCTGCGC
ACCGCGTTGA TGATGCTGGC GATGTCGATC GGCGTCGCCG CGGTGGTGGT ACTCACCGCG
CTCGGCGACG GCGCGCGGCG CTACGTGGTG AACGAGTTCT CCGCGCTCGG TGCCAGCCTG
CTGATCGTGC TGCCCGGACG CACCGAGACC GGTGGCGTCA ACGCGGGCAG CTTCGTCAGC
AGCACGCCGC GCGAGCTCAC CAACGCCGAC GCCGCCGCAC TGTTGCGCTT GCCGCTGGTG
CAGCGCGTGG CGCCGCTCGC GGTGGGCAAC TCCGAGATCG CCGTCGGCGG CCGGCTGCGC
GAGGTCACGG TCGTCGGCAC CAGCGCCGAC TTCCTCGAGC TGCGCGGTCT GAAGATCGGC
CACGGCGGCT TCCTGCCGCG CGAGGACTTC AACCGCGCCT CGGCGGTGGC TGTGATCGGC
GACGCGCTGC GCAGCGAACT CTTCCCCGGA CAGAGCGCGG TGGGCCGCAT GATCCGTGTC
GGCGACACCC GGCTGCGCGT GATCGGCGTG CTCACGCCAT CCGGGCGCGG GCTGGGCATG
ACCACCGACG AGCTGGTGCT GGTGCCGGTG GCGACCGCGC AGGCGATGTT CGACACCAGC
GGGCTGTTCC GCATCTTCGT CGAGGCGCGC GGGCGCGAGG CCTTGCCCGC GACGCAGCGC
CAGATCGAGG AGCGCCTGCG CGCGCGCCGC GACGACGAGC TCGACTTCAC CGTGATCACC
CAGGACGCCG TTCTCGGCAC CTTCGACCGC ATCCTCGGGG CGCTCACCCT GGGCGTGGCC
GGCATCGCCG CGATCAGCCT GGCAGTCGCG GGCATCCTGG TGATGAACGT GATGCTGGTC
GCGGTCACCC AGCGCACCGC CGAAATCGGC CTGCTCAAGG CGCTCGGCGC GCGCGCCGGC
ACCATCCGCG CCGCCTTCCT CGCCGAGGCC GCGCTGCTCT CCGTCGCCGG CGCGCTCGCC
GGCTTCGCGC TCGGCCACGC CGGCGCCTGG GGCGTGCGCC TGGCTTTCCC GCAGCTGCCG
GCGTGGCCGC CCGACTGGGC GGTGATCGCC GCGCTCGCCA CCGCGCTCGG CACCGGGGTG
CTGTTCGGCG TGCTGCCCGC GCGCCGCGCC GCCCGGCTCG ATCCGGTGCA GGCCTTGTCG
AAGCGGTAG
|
|---|
| Protein sequence | MSPADTLRFA TRAATAWPLR TALMMLAMSI GVAAVVVLTA LGDGARRYVV NEFSALGASL
LIVLPGRTET GGVNAGSFVS STPRELTNAD AAALLRLPLV QRVAPLAVGN SEIAVGGRLR
EVTVVGTSAD FLELRGLKIG HGGFLPREDF NRASAVAVIG DALRSELFPG QSAVGRMIRV
GDTRLRVIGV LTPSGRGLGM TTDELVLVPV ATAQAMFDTS GLFRIFVEAR GREALPATQR
QIEERLRARR DDELDFTVIT QDAVLGTFDR ILGALTLGVA GIAAISLAVA GILVMNVMLV
AVTQRTAEIG LLKALGARAG TIRAAFLAEA ALLSVAGALA GFALGHAGAW GVRLAFPQLP
AWPPDWAVIA ALATALGTGV LFGVLPARRA ARLDPVQALS KR
|
|---|
| |