Gene Tmz1t_3477 details

Gene Information

• Locus tag: Tmz1t_3477
• ID: 7872983
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 3811494
• End bp: 3812189
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 643700417
• Product: ABC transporter related
• Protein accession: YP_002890448
• Protein GI: 237654134
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCCAGA TCGAACTCGA GCACATCGAC CGCATCTTCA AGCTCGGCGA CAGCGAGGTG 
CACGCCCTGC GCGACATCAC GCTGCGCATC GAGCCCGGCG AGTACGTCGC GGTCATGGGA 
CCGTCGGGTT CCGGCAAATC GACGCTGCTC AACCTGCTCG GTCTGCTCGA CCGCCCCGAC 
GCCGGCCATT ACCGGCTCGA AGGCCGCGAC GTCACCACAC TCTCGGCCGA CGAGCAGGCC 
GCGGTGCGCA GCGCACGCAT CGGCTTCGTG TTCCAGAGCT TCCACCTCGT CCCCCGCCTC 
AGCGCGGCCG AGAACATCGG CCTGCCGCTG GTGCTCGCCG GCATCCCCGT CGCCGAGCGC 
GCTGCTCGCA TCGCGCAGGC CTTGCAGGAC TTCGGCCTCG AGGGGCGCGC CCGGCACCGC 
CCCGACGAAC TCTCCGGCGG CCAGCGCCAG CGCGTCGCGA TCGCGCGTGC CACCATCATG 
CGGCCGGCGA TGCTGCTCGC CGACGAGCCC ACCGGCAACC TCGACCGCGC CACCGGCCAC 
GAGGTCACCG CGCTGCTCGA GGCGCTCAAC GCCGCCGGCA CCACGCTGAT CGTCGTCACC 
CACGACCCTT CGATGGGCGA GCGCGCACAC CGCCGCATCC TGATGGAGGA CGGCGCGATC 
CGTCAGGACC TGCGCACCGC CGCACCGCCC CCATGA 

 

Protein sequence

MAQIELEHID RIFKLGDSEV HALRDITLRI EPGEYVAVMG PSGSGKSTLL NLLGLLDRPD 
AGHYRLEGRD VTTLSADEQA AVRSARIGFV FQSFHLVPRL SAAENIGLPL VLAGIPVAER 
AARIAQALQD FGLEGRARHR PDELSGGQRQ RVAIARATIM RPAMLLADEP TGNLDRATGH 
EVTALLEALN AAGTTLIVVT HDPSMGERAH RRILMEDGAI RQDLRTAAPP P