Gene Tmz1t_3473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3473 
Symbol 
ID7872979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand- 
Start bp3806801 
End bp3807469 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content68% 
IMG OID643700413 
ProductOmpA/MotB domain protein 
Protein accessionYP_002890444 
Protein GI237654130 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.773207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TCATCGTCAC CCTTTCCGCG GTCGCGCTCG CCGTGAGCGG TCTTTCCGGC 
TGCGCGAACA TGAACGAGAC CCAGCGCGAC ACGGGCATGG GAGCCGCCAT CGGCGCCGTG 
GCCGGCGGCC TCATCGGTGC CGCCACCGCG GGCGGCAACA AGGGCAAGAG CGCCGCAACC 
GGTGCTGCGA TCGGCGCTGC ACTCGGGGCG GGCGGCGGCT ACCTGTGGTC GCAGAACATG 
CAGAAGCAGC GCGCCGAGAT GGAGCAGGCG ACCGCGGGCA CCGGCATCGG CATCAGCCAG 
ACGACCGACA ACCAGCTCAA GGTCGACATT CCCGCGGACG TTTCCTTCGA CGTGGGCCGC 
CACGCGATCA AGCCCAACAT GCGTCCGGTG CTCGACCGTC TGGCCAGCAC GCTGAACCAG 
CATCCGGTGA CCACGGTGAC CATCATCGGC CATACCGACA GCACCGGCTC GGATGCGGTG 
AACGATCCGC TATCGATCAA CCGCGCCGCC GCCACCCGCG ATTATCTGGT GCAGCGTGGC 
GTGTCCGCGC AGCGCATCGC GGTCGATGGG CGCGGCTCGC GCCAGCCGGT CGCCGACAAC 
TCGACGGCCT CCGGCCGTGC GATGAACCGC CGCGTGGAGA TCTTCATCGC GGAGCCGGCA 
CAGCGCTGA
 
Protein sequence
MKKIIVTLSA VALAVSGLSG CANMNETQRD TGMGAAIGAV AGGLIGAATA GGNKGKSAAT 
GAAIGAALGA GGGYLWSQNM QKQRAEMEQA TAGTGIGISQ TTDNQLKVDI PADVSFDVGR 
HAIKPNMRPV LDRLASTLNQ HPVTTVTIIG HTDSTGSDAV NDPLSINRAA ATRDYLVQRG 
VSAQRIAVDG RGSRQPVADN STASGRAMNR RVEIFIAEPA QR