| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3456 |
|---|
| Symbol | |
|---|
| ID | 7872962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 3778741 |
|---|
| End bp | 3780012 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643700396 |
|---|
| Product | 3-deoxy-D-manno-octulosonic-acid transferase |
|---|
| Protein accession | YP_002890427 |
|---|
| Protein GI | 237654113 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACCC GCCTGCCCTA CACCTTGCTG TGGATCCTCG CCCTGCCCCT GGTGCTGCTG
CGCCTGGCCT GGCGGGCGCG CCACCAGCCC GCCTATCTGC GCCACGTCGG CGAGCGCTTC
GGGCGCTACC GGACGCGCGC GCCGGTGGGG GTGATCTGGG TGCACGCGGT CTCCGTGGGC
GAGACCCGCG CCGCCGAACC GCTGGTGCGC GCCCTGCTCG CCGAATGGCC GGAGCACTCG
GTGCTGCTCA CCCACATGAC GCCGACCGGT CGCGACACCT CGAAAACCCT CTTCCGCGAC
GAGCCGCGTG TGCTGCGCGC CTACCTGCCC TACGACCTCG GCTGCTTCGC CCACGCCTTC
CTGCGCCACT TCCGCCCGCT GTTCGGAGTG GTGATGGAGA CCGAGCTGTG GCCCAACCTC
CTCGCCGCCT GCCGACGCCG CCGCATTCCG GTGATGCTCG CCAACGCCCG TCTGTCGGAG
CGCTCGGCGC GTCGCTACGC CCGCCTGCCC GCGCTCACCG CGCTCACCCT GAAGGCACTC
GCGGCGATCG GCGCGCAGAC CGCCGCCGAC GCCGCCCGCC TCGCCCAACT CGGCGCGCGC
CGAGTCACGG TCACCGGCAA CCTCAAGTTC GACATCGCCC CGCCGGCGCC GCTGCTGGCG
CTCGGCCGCA GCCTGCGCGA ACGCATCGGC GCGCGCCCGG TGCTGCTCGC CGCGAGCACC
CGCGAGGGAG AGGAGGCCCT GCTGCTCGAC GCCTTCGCCC GCCTGGCGCC GCCCGCGGCC
TTGCTGCTGC TGGTGCCGCG CCACCCGCAG CGCTTCGACG AGGTCGCCGC GCTCGCCAGC
GCCCGCGGCC TCGCGCTGCA GCGGCGCAGC GCGGACGACG CGGTGCGTGC GGACACGCGC
GTGCTGCTCG GCGACTCGAT GGGCGAGATG TTCGCCTACT ACGCCGCCGC CGACGTCGCC
CTGATCGGCG GCAGCTGGCT GGCCTTCGGC GGGCAGAACC TGATCGAGGC CTGCGCGGTC
GGCACCGCGG TGGTGATCGG CCCGCACACC TTCAATTTCC AGGCGGTGGC CGAGGACGCC
GAGCGCGCCG GTGCCGCGGT GCGCGCGCGG GATGCGGAGG CCGGCATGCG CGAGGCGCTG
GCGCTGGTCG CCGACCCGGC GCGGCGCGCG CAGATCGCCG CCGCGGGGCG CGCCTTCGCG
ACCACGCACC AAGGCGCGAC CGCGCGCAGC GTTGCGCTGC TCACGGCGCT GGCTGCGAGG
CGTGAGGCGT GA
|
|---|
| Protein sequence | MLTRLPYTLL WILALPLVLL RLAWRARHQP AYLRHVGERF GRYRTRAPVG VIWVHAVSVG
ETRAAEPLVR ALLAEWPEHS VLLTHMTPTG RDTSKTLFRD EPRVLRAYLP YDLGCFAHAF
LRHFRPLFGV VMETELWPNL LAACRRRRIP VMLANARLSE RSARRYARLP ALTALTLKAL
AAIGAQTAAD AARLAQLGAR RVTVTGNLKF DIAPPAPLLA LGRSLRERIG ARPVLLAAST
REGEEALLLD AFARLAPPAA LLLLVPRHPQ RFDEVAALAS ARGLALQRRS ADDAVRADTR
VLLGDSMGEM FAYYAAADVA LIGGSWLAFG GQNLIEACAV GTAVVIGPHT FNFQAVAEDA
ERAGAAVRAR DAEAGMREAL ALVADPARRA QIAAAGRAFA TTHQGATARS VALLTALAAR
REA
|
|---|
| |