| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3450 |
|---|
| Symbol | |
|---|
| ID | 7872956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 3773461 |
|---|
| End bp | 3774396 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643700390 |
|---|
| Product | PfkB domain protein |
|---|
| Protein accession | YP_002890421 |
|---|
| Protein GI | 237654107 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATCC TCGTCTGCGG ATCGGTCGCC TACGACTCGA TCATGGTCTT CCACGACCGC
TTCCGGAATC ACATCCTCCC CGAGCAGATC CATATCCTCA ACGTCTCCTT CCTGGTGCCC
GACCTGCGCC GGGAGTTCGG CGGCTGTGCC GGCAACATCG CCTACGGGCT CAAGCTGCTC
GGCAGCGATC CGCTGATCGT CGCCACCGTC GGCGAGGACG CCGGCCCGTA TCGTGCGCGC
CTGCGCGCGC TCGGGCTGCG CGAGGACTTC GTGCGCGAGG TGCCGGGCAC CTTCACCGCG
CAGGCCTTCA TCACCACCGA CCTCGACGAC AACCAGATCA CCGCCTTCCA TCCGGGGGCG
ATGTTCCACT CGCACCTGAA CGACGTGCGC ACCGCGGCCG GTGCGACGCT GGGCATCGTC
TCGCCCGACG GCGCCGACGG CATGCTGCGC CACGCCGACG GCTTCGCCGC GGCCGGGGTG
CCCTTCGTGT TCGATCCGGG CCAGGCCCTG CCCATCCTCG GTAGCGAAGC GTTACTGAAA
TGCCTGCAAC AGGCGCGCTA CTGTACGGTC AATGACTACG AGGCCCGGCT GATGTGCGAG
AAGACCGGGC GCAGCGAGGC CGAACTCGCG CGCGAGGTCG AGGCGCTGGT GGTGACGCTG
GGTGCGGAAG GTTCGCGCGT GCATTGGCGC GGCGAGGTGT TCGAGGTGCC GGCGGTGAGG
GCGGACGCGA TCGTCGATCC GACCGGTTGC GGCGACGCCT ACCGTGCCGG CCTGCTGCAC
GGTATCGCCG CGGGCTGGGA CCTGCGCAGG AGCGCGCGCC TGGCCGCGGT CATGGGCGCG
CTCAAGATCG CCCAGCGTGG CGGACAGAAC TACGCGCCCT CGCGTGCAGA CGTCGGGGCG
CGTTATCGCG AGGCTTTCGG AGAGGATCTA TGGTGA
|
|---|
| Protein sequence | MSILVCGSVA YDSIMVFHDR FRNHILPEQI HILNVSFLVP DLRREFGGCA GNIAYGLKLL
GSDPLIVATV GEDAGPYRAR LRALGLREDF VREVPGTFTA QAFITTDLDD NQITAFHPGA
MFHSHLNDVR TAAGATLGIV SPDGADGMLR HADGFAAAGV PFVFDPGQAL PILGSEALLK
CLQQARYCTV NDYEARLMCE KTGRSEAELA REVEALVVTL GAEGSRVHWR GEVFEVPAVR
ADAIVDPTGC GDAYRAGLLH GIAAGWDLRR SARLAAVMGA LKIAQRGGQN YAPSRADVGA
RYREAFGEDL W
|
|---|
| |