| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3448 |
|---|
| Symbol | |
|---|
| ID | 7872954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 3771711 |
|---|
| End bp | 3772907 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643700388 |
|---|
| Product | MJ0042 family finger-like protein |
|---|
| Protein accession | YP_002890419 |
|---|
| Protein GI | 237654105 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02098] MJ0042 family finger-like domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.230749 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGATCA CCCGCTGCCC CGCCTGCCAG ACGGTGTTCC GGCTGCGCCC GGAGCAGCTT
CACGCACGGG GCGGCGAGGT CCGCTGCGGG CATTGCTTCC ACCCCTTCAA CGCGCTCGAG
CACACGGTCG AGGTTCGCGA CGACGGCGCC GCGACCACAG CGGCGCCCCC ACCCCCCGCG
GCGAGACCGG TGTATGAAGC ACGCCCCGAA CCGCTGCTCG ACTTCGACAT CCCCGAGGTT
GCCCCCTCGC CGCCGATCCG GGCGCCGCTG CCCGAGCCGG GTCTCGACGA CTACGAGGAC
TGGCTCGCGC CCGCGCACAA GCCCGCGCTG CGCGGCACCG CGATGGACGA CGGGCAGACC
GGCACGGCCC CCGCCTTCGA CGAGGGCGCC GCAGCGGCCC AGCCCTTTCC GGAAGTCTTG
CGCAGCGCCC GGCGAGGCCT GCCGATCGAC GAGGACGAGG GCGGAACGCC TGCTCGCGGC
AGGGACCTCG CCGCGCCCGG GCCCTTCGCA CCGACGATCT CCTACACGCC ACCGCCGCCC
TTCGACGACG ATCCGGCCAC CGCAATCCCC GGGCTCTCCA CCCCCGTGCG CGAATCCGCG
CGGGCCGCAC CGGAACCCGC CTCCATCCCT GCACACGAGG ATGAACAACC CGCCTCGCCT
CACGAGCCCG ACCTCGCCCG CCTCGACGCC AACTACGGAC GCCCGCGCAA GGAAACCCAC
CCGCTCGTAC GCGCGCTCGC GATGCTGCTC GCGGTCGGCT TGTCCGCGCT GCTCGCGGCG
CAGGCCACCT ATCTGTATCG CATGGAGCTG GCGCGCGCCC TCCCCGGCCT GCGCCCCGTC
CTGAGCGAGG CCTGCGCGCG CTTCGGCTGC GGCGTGCCCT ATCCGCGCGA TGCGGAACAC
ATCGCGATCG AGGCCTCCGA CCTGCAGGCC GAACCCGGGC GGCCCGGCTA CTACCTGCTG
CAAGCCACGC TCAACAACCG CGCGGACTAT CCGCAGCAGT GGCCGCATCT GGAACTCACC
CTCACCGACG CCGGCGACAA CCCGATCTCG CGCCGCGTGC TGCCATCCAC CGACTGGCTG
CCACCGAGCC AGCCGCACGA AGCCTTCATG GCACGCAGCG CGATCGAGTT GCGCATTCCC
TTCGCCGCAC CGGCGCTGGC ACCGACGGGA TACCGGATCT ATGCATTCTA TCCGTGA
|
|---|
| Protein sequence | MMITRCPACQ TVFRLRPEQL HARGGEVRCG HCFHPFNALE HTVEVRDDGA ATTAAPPPPA
ARPVYEARPE PLLDFDIPEV APSPPIRAPL PEPGLDDYED WLAPAHKPAL RGTAMDDGQT
GTAPAFDEGA AAAQPFPEVL RSARRGLPID EDEGGTPARG RDLAAPGPFA PTISYTPPPP
FDDDPATAIP GLSTPVRESA RAAPEPASIP AHEDEQPASP HEPDLARLDA NYGRPRKETH
PLVRALAMLL AVGLSALLAA QATYLYRMEL ARALPGLRPV LSEACARFGC GVPYPRDAEH
IAIEASDLQA EPGRPGYYLL QATLNNRADY PQQWPHLELT LTDAGDNPIS RRVLPSTDWL
PPSQPHEAFM ARSAIELRIP FAAPALAPTG YRIYAFYP
|
|---|
| |