Gene Tmz1t_3442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3442 
Symbol 
ID7872948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand+ 
Start bp3765767 
End bp3766426 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content69% 
IMG OID643700382 
Producttransport-associated 
Protein accessionYP_002890413 
Protein GI237654099 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.933167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGAC CCCAACACGC CGACAGACCG GCGAAGTCCA GCCGGCGCGC CCTCCTCCTG 
GGCCTTTCCG CAGCCATCGC ACTGCCCTTG CTGCAGGGCT GCTTCCCGGT CGTCGCCACC 
GGTGTCGGCG CGGGTGCGGC GATGGTCTCC GACCGTCGCA CCAGCGGCAC CTATGTCGAG 
GACGAAGGGA TCGAATGGAA GGTGGCGGCG CGCATCCGCG AGCGCCTCGG CGACAGCGTG 
CATGTCAACG TCACCTCCTA CAACCGCAAC GTGCTGCTCA CCGGCGAAGC GCCCAACGAG 
ACCGTGCGCG GCCAGCTCGA TGGCATCGTG GCCGGCGTCG AGAATGTGCG CGGCGTGATC 
AACGAAGTCG CCATCGCGCC CAACTCCAGC CTCACCGCGC GCGGCAACGA CACCTTGATC 
ACCTCCAACG TGAAGGCGCG CATGATCGAC TCCGGGGCCG TCTCGGCCCA CAACGTCAAG 
GTGGTGACCG AGGCCAACGT CGTCTTCCTG CTCGGCATCG TCCCCCGCAG CGAGGCCGAC 
GCCGCCGCCG AGGTGGCGCG CACCAGCCAA GGCGTGCGCA AGGTCGTGCG GGTGTTCGAA 
TACATCAGCG ACGAGGAAGC CCGCCGCCTC GACAACCCGA CCGGCGCGCG CCGTAACTGA
 
Protein sequence
MTRPQHADRP AKSSRRALLL GLSAAIALPL LQGCFPVVAT GVGAGAAMVS DRRTSGTYVE 
DEGIEWKVAA RIRERLGDSV HVNVTSYNRN VLLTGEAPNE TVRGQLDGIV AGVENVRGVI 
NEVAIAPNSS LTARGNDTLI TSNVKARMID SGAVSAHNVK VVTEANVVFL LGIVPRSEAD 
AAAEVARTSQ GVRKVVRVFE YISDEEARRL DNPTGARRN