| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3431 |
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| Symbol | |
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| ID | 7873922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 3754981 |
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| End bp | 3756393 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643700371 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase |
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| Protein accession | YP_002890402 |
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| Protein GI | 237654088 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.644743 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAGCC TGCACGACGC CACGCGCGCA CTCGCCTGCC ATGGTGCGCG GGCGACCGGG
GAAGGGCGCT TCGACAGCGT CGGTACCGAT ACCCGCGCGC TCGCGCCCGG GCAGCTCTTC
GTCGCCCTGC GCGGCGAGCG CTTCGACGGC CACGACTTCG TCGCCGATGC GGCGAAGGCG
GGCGCCGCCG CGGCCATGGT CGATGCCGCC TGGAGCGCCG GCAAGGCCGA TGCCGGCCTG
CCCCTGCTGG TGGTGGACGA CACGCGGCGT GCGCTCGGCA CGCTCGCGGC GGCTTGGCGG
GCGCGTTTCG CGCTGCCCCT GATCGGCGTC ACCGGCAGCA ACGGCAAGAC CACGGTGAAG
GAGATGTGTG CCGCGATCCT GCGCGTGCAG GCGAGCCGCG ACGGCTTCGG CGAGGAGTCG
GTGCTCGCTA CGCGCGGCAA CCTGAACAAC GACATCGGCA TGCCGCTCAC GCTGCTCGAA
CTGCGCGACT TCCATCGCGC CGCGGTGATC GAGATGGGGA TGAACCATCC CGGCGAGATC
GGCTACCTGA GCGCGCTCGC CCAGCCCACG GTGGCCCTGG TGAACAACGC CCAGCGCGCC
CACCTCCAGG GCATGGGCTC GGTCGACGAG GTCGCGCGCG AGAAGGGCGC GATCTACGAA
GGCCTGGGCG GGGCAGGCGT GGCGGTGATC AACGCCGACG ATCCGCACGC CGGCTACTGG
CGTTCGCTCA ACGCCGGGCG GCCGATTGTG ACATTCGGTA TCGACCATCC GGCGGACGTG
TCCGCGCGGT GTACCCTGCG CGGCCTCGGC TCGCGGCTCG AACTCGACAT CCCGCAAGGG
AAGATCGATT TCGCCTTGCA GGTGCCGGGT CTGCACAACG TGCGCAACGC GCTCGGCGCG
GCGGCGGCCT GCCTCGCGGC AGGGGTTCCG CTCGAAGCGG TGGCCGAGGG ACTGGCGGGT
TTCGCCGGCA CCCGCGGTCG CCTGCAACGC CGTTCCGGGC CGCGGGGCGC GCTGATCCTG
GACGATTCGT ACAACGCCAA TCCGGATTCG GTGCGCGTCG GCATCGACGT CCTCGCCGCC
ATGCCGGGCC ATACCTGGCT GGTGCTCGGC GACATGGGCG AGGTCGGCGA GACCAGCGCC
CAGGTTCACG ACGAGGTCGG TGGCTATGCG AAGAGCAAGG GCATCGACGG CCTCTTCGCG
CTCGGCGAGA TGAGCGCGGT GGCGGCGCAC AACTTCGGCG AGGGCGCGCG CCATTTCACT
TCGGTGGAGG CGCTGGTCAA GGCGCTCGTG CCGCGCCTGG ATGCGGACTC GGTGGTGCTG
GTGAAGGGCT CGCGCTTCAT GCGCATGGAA AGGGTGGCGG ATGCGCTTGC GGCAGTGCAC
AATCCGGCCC CTTCAACGGA AACCGGCTCC TGA
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| Protein sequence | MMSLHDATRA LACHGARATG EGRFDSVGTD TRALAPGQLF VALRGERFDG HDFVADAAKA
GAAAAMVDAA WSAGKADAGL PLLVVDDTRR ALGTLAAAWR ARFALPLIGV TGSNGKTTVK
EMCAAILRVQ ASRDGFGEES VLATRGNLNN DIGMPLTLLE LRDFHRAAVI EMGMNHPGEI
GYLSALAQPT VALVNNAQRA HLQGMGSVDE VAREKGAIYE GLGGAGVAVI NADDPHAGYW
RSLNAGRPIV TFGIDHPADV SARCTLRGLG SRLELDIPQG KIDFALQVPG LHNVRNALGA
AAACLAAGVP LEAVAEGLAG FAGTRGRLQR RSGPRGALIL DDSYNANPDS VRVGIDVLAA
MPGHTWLVLG DMGEVGETSA QVHDEVGGYA KSKGIDGLFA LGEMSAVAAH NFGEGARHFT
SVEALVKALV PRLDADSVVL VKGSRFMRME RVADALAAVH NPAPSTETGS
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