| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3429 |
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| Symbol | murD |
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| ID | 7873920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 3752494 |
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| End bp | 3753894 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643700369 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_002890400 |
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| Protein GI | 237654086 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.473024 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCAC TCACCGGAAA ACACGTCCTC GTCCTCGGGC TCGGCGAATC GGGCCTGGCC
ATGGCGCGCT GGTGCGCCCT GCGCGGGGCG CGCGTGCGCG TGGCCGACAG CCGCGCCGTC
CCGCCCGGGG TCGACGCGCT GAAGGCGGAC GCGCCGCTGG CCGAGATCTT CCTGGGCAGC
TTCGGCGACG AGGTGCTCGA CGGGGTCGAT CTGGTCGCGC TCAGCCCCGG GCTCGACCCG
CGCGTCGGGG TCGCCGCGCA GGCGCGTCGG CGCGGCCTGC CGCTCACCGG CGAGATGAGC
CTGCTCGCGC AGGCGCTCGA CGAGCTCGGC GTGCGCGCGC AGACGCGCAT CCTCGCCATC
ACCGGCACCA ACGGCAAGAC CACCACGACC GCGCTCACCG CGGCGCTGGC GCAGTCGGTC
GGCATCGACG CGGTCGCCGC CGGCAACATC AGCCCGGCGG CGCTCGACGT GCTGATGGAG
CGCCTGGAGA TCGGCGCCGC GCTGCCCGCG TGCTGGGTGC TGGAACTCTC CAGCTTCCAG
ATCGAGACCA TGCGGGGCCT GGACGCCGAG GCGGCAATCG TGCTCAACGT CACCGACGAC
CACCTCGACC GCTACGCCGA CCTCGAGGAA TATGCCGCCA CCAAGGCGGC GATCTTCCAG
GGCGAGGGCG TGCAGGTGCT CGCTCGCGAG GACGCGCGCG TGGCGGCCAT GGCGCTGCCC
GGCCGGCGCA CGATCCGCTT CGGCACCGCG GCGCCGGCGA GCGACACCGA CTACGGTCTG
GCCGACCTCG ACGGCCGCGC CTGGCTGCTG CGCGGCGGCG AGCGCCTGCT CGCCCTCGAC
GAGCTGCCGC TCGCCGGCCG CCACAACGCC GCCAACGCGC TCGCCGCGCT CGCGCTCTGC
GAGGGCGGGC TCGGTATTGC GCCGCAGATC CTGATCCCCG GGCTGAAGGC CTTCCGCGGA
CTGCCGCACC GGGTCGAGCT GGTCGCCGAG CGCGCCGACG GCGTGCGTTT CTACGACGAC
TCCAAGGGCA CCAACGTCGG CGCCACGGTG GCTGCGCTCG CCGGCATGGA CTGCCCGGTG
GTGCTGATCG CCGGCGGTGA CGGCAAGGGC CAGGACTTCT CGCCGCTCGC CCCGGTACTC
GCCGGCAAGG CGCGCGCGCT GCTGCTGATC GGTCGCGACG CCGACCGCAT CGAGCAGGCG
GTGGCGGGAT GCGGCGTGGC GATCGAGCGC GCGCCCGACC TCGATGCCGC GGTGGCGCGC
GCCAATGCCT GGGCGCAGGC GGGTGACGCG GTCCTGCTCT CGCCCGCCTG CGCCAGCCTC
GACATGTTCC GCAACTACGC CCACCGCGCC GAGGTGTTCG TCGCTGCGGT GCGTCGCCTG
CCCGGAGTGA AGCCGCGATG A
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| Protein sequence | MSALTGKHVL VLGLGESGLA MARWCALRGA RVRVADSRAV PPGVDALKAD APLAEIFLGS
FGDEVLDGVD LVALSPGLDP RVGVAAQARR RGLPLTGEMS LLAQALDELG VRAQTRILAI
TGTNGKTTTT ALTAALAQSV GIDAVAAGNI SPAALDVLME RLEIGAALPA CWVLELSSFQ
IETMRGLDAE AAIVLNVTDD HLDRYADLEE YAATKAAIFQ GEGVQVLARE DARVAAMALP
GRRTIRFGTA APASDTDYGL ADLDGRAWLL RGGERLLALD ELPLAGRHNA ANALAALALC
EGGLGIAPQI LIPGLKAFRG LPHRVELVAE RADGVRFYDD SKGTNVGATV AALAGMDCPV
VLIAGGDGKG QDFSPLAPVL AGKARALLLI GRDADRIEQA VAGCGVAIER APDLDAAVAR
ANAWAQAGDA VLLSPACASL DMFRNYAHRA EVFVAAVRRL PGVKPR
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