| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3410 |
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| Symbol | secF |
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| ID | 7873901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 3730362 |
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| End bp | 3731294 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643700350 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_002890381 |
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| Protein GI | 237654067 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.470733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTCT TCCGCATCAA GAAAGACATC CCCTTCATGC GCCACGCGCT GGTGTTCAAC
GTCATCTCGT TGCTCACCTT CGCGCTGGCG GTCTTCTTCC TCCTCACCCG CGGCCTGCAC
CTGTCGGTGG AGTTCACCGG CGGCACCTTG GTCGAGGTCA GCTACGCCCA GGCACCGCAG
CTCGAGCCGA TTCGCGAGGC GCTGGCCGGC AGCGGCTACC CCGACGCGCA GGTGCAGAAC
TTCGGCAGCG CACGCGACCT GCTGATCCGC CTGCCCAACC GCGAGGATCT GGATACCTCG
CGCGTGTCGG AGACGGTGAT GAACACGCTG CAGCAGGTCG GCGGCCCCGC CCCCGAGCTG
CGCCGGGTGG AATTCGTCGG CCCGCAGGTC GGCAAGGAGC TCGCCGCCGA CGGCTCGATG
GCGCTGCTGC TGGTGATCGT CGGCATCATG ATCTACTTGG CGCTGCGCTT CGAGTGGCGC
TTCGCGGTGT CGGCGATCAT CGCCAACCTG CACGACGTCA TCATCATCCT GGGCTTCTTC
GCCTTCTTCC AGTGGGAGTT CTCGCTCCCG GTGCTGGCGG CGGTGCTGGC GGTGCTGGGC
TACTCGGTGA ACGAGTCCGT GGTGGTGTTC GACCGCGTGC GCGAGACCTT CAAGAAGAAG
CGCAACATGA CCACGCCGCA GGTGCTGGAC CACGCGATCA CGAGCACCAT CTCGCGCACC
GTGATCACCC ACGGCAGCAC GCAGGTGATG GTACTGTCGA TGCTCGTCTT CGGCGGCGAG
ACGCTGTACT ACTTCTCGCT CGCGCTGACG ATCGGCATCT GCTTCGGCAT CTACTCCTCG
GTGCTGGTGG CGAGCCCGCT GGTGATGTGG CTGGGCGTGT CGCGCGAGCA GTTCATCAAG
CCGAAGAAGG AGAAGGAAGA GGCGGTGGTC TGA
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| Protein sequence | MEFFRIKKDI PFMRHALVFN VISLLTFALA VFFLLTRGLH LSVEFTGGTL VEVSYAQAPQ
LEPIREALAG SGYPDAQVQN FGSARDLLIR LPNREDLDTS RVSETVMNTL QQVGGPAPEL
RRVEFVGPQV GKELAADGSM ALLLVIVGIM IYLALRFEWR FAVSAIIANL HDVIIILGFF
AFFQWEFSLP VLAAVLAVLG YSVNESVVVF DRVRETFKKK RNMTTPQVLD HAITSTISRT
VITHGSTQVM VLSMLVFGGE TLYYFSLALT IGICFGIYSS VLVASPLVMW LGVSREQFIK
PKKEKEEAVV
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