| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3396 |
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| Symbol | |
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| ID | 7873887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 3714740 |
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| End bp | 3716023 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643700335 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_002890367 |
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| Protein GI | 237654053 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.903787 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCG CAATCATCTT CATCCTGCTG CTGGTGTTGA TGCTCACCGG CATGCCGATC
TCCATTTCGC TCGGCCTCAC CGTGCTGACC TTCCTCTTCA CGATGACCGA GGTGCCGATC
GAGTCGGTGG CACTCAAGCT GTTCACCGGC ATCGAGAAGT TCGAGATCAT GGCGATCCCG
TTCTTCATCC TCGCAGGCAA CTTCCTGACC CATGGCGGCG TCGCGAGGCG GATGATCAAT
TTCGCCACCT CGATGGTCGG TCACTGGCAC GGCGGCCTGG GGCTGGGCGG CGTAGTCGCC
TGCGCCCTGT TCGCCGCGGT GTCGGGGTCG AGCCCGGCGA CGGTGGTTGC GATCGGCGCG
ATCCTGCTGC CGGCGATGGT CAAGCAGGGC TTTCCGAACA AGTTCGGTGC CGGCGTGATC
ACCACCTCGG GTGCGCTCGG GATCCTGATT CCGCCCTCGA TCGTGATGGT CATGTACTCG
GTGTCGACCA ACACCTCGGT CGGCGCCCTG TTCATGGCGG GCGTCGTGCC CGGCATCCTG
CTTGCGGCCT TCCTCGGCTT CACGACCTGG AACCGTGCGC GCAAGTTCGG CTACCCGCGC
CTTCCGAAGG CGACCTGGGC ACAGCGTGCG AAGGCGTTCA AGGATTCGGC CTGGGGGTTG
TTCCTGATCG TGGTGGTCAT GGGCGGCATC TACACCGGCA TCTTCACGCC CACCGAGGCG
GCGGCGATGA GTGCGGTGTA TGCGTTCTTC GTCGCGGTGT TCGTGTACAA GGATCTGGGC
ATGAAGGACG TGCCCAAGGT GCTGCTGAAC TCCGCCAACA TGAGCGCGAT GCTGCTGTAC
ATCATCACCA ACGCGGTCTT GTTCTCCTTC CTGCTCACGC ACGAGAACAT CCCGCAGGAA
ATGGCCGACT TCATGATCGG AACCGGCGTG GGGATGATCG GCTTCCTGAT CATGGCCAAC
ATCCTGATGC TGATCGCGGG CAACTTCATG GAGCCGTCAT CGATCGTGCT GATCCTGGCG
CCGATCCTGT TCCCGATCGC CATCAAGCTG GGCATCGATC CGGTGCACTT CGGCATCATC
ATGGTGGTGA ACATGGAAGT GGGCATGTGC CACCCGCCGG TGGGCCTGAA CCTGTATGTC
GCCAGTGGCA TCACCAAGAT GGGCATCACC GAGCTCACGG TGGCGGTCTG GCCGTGGCTG
CTGTCGATGC TGGTGTTCCT GGTGCTGGTC ACCTACTGGC CCGCCATGTC GCTGTGGCTG
CCGCGCACGC TCGGCATGAT GTGA
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| Protein sequence | MSAAIIFILL LVLMLTGMPI SISLGLTVLT FLFTMTEVPI ESVALKLFTG IEKFEIMAIP
FFILAGNFLT HGGVARRMIN FATSMVGHWH GGLGLGGVVA CALFAAVSGS SPATVVAIGA
ILLPAMVKQG FPNKFGAGVI TTSGALGILI PPSIVMVMYS VSTNTSVGAL FMAGVVPGIL
LAAFLGFTTW NRARKFGYPR LPKATWAQRA KAFKDSAWGL FLIVVVMGGI YTGIFTPTEA
AAMSAVYAFF VAVFVYKDLG MKDVPKVLLN SANMSAMLLY IITNAVLFSF LLTHENIPQE
MADFMIGTGV GMIGFLIMAN ILMLIAGNFM EPSSIVLILA PILFPIAIKL GIDPVHFGII
MVVNMEVGMC HPPVGLNLYV ASGITKMGIT ELTVAVWPWL LSMLVFLVLV TYWPAMSLWL
PRTLGMM
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