| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3390 |
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| Symbol | ispG |
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| ID | 7873881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 3709080 |
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| End bp | 3710339 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643700329 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_002890361 |
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| Protein GI | 237654047 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCCC GACACGAACT CCAGCCGATC GAAGCCCGCC CGCTCGCCCG TCATCGCACC
CATCAGGTGC GCGTCGGCAA GGTGAGGATC GGCGGCGAAG CCCCGGTCGT CGTGCAGTCG
ATGACCAATA CCGACACGGC CGACGTGCTC GCCACCGCGA TGCAGGTCGC CGAGCTCGCC
CGCGCCGGCT CCGAGATCGT GCGCATCACG GTCAACAACG AGGCCGCGGC GGCGGCGGTG
CCGAAGATCC GCGACCGCCT GCTCGCGCTC AACATGGACG TGCCGCTGGT CGGCGACTTC
CACTACAACG GCCACAAGCT GCTCACCGAC TTCCCGGCGT GCGCCGAGGC GCTCGCCAAG
CTGCGCATCA ACCCGGGCAA CGTCGGCGCC GGCCGCAAGC GCGACCCGCA GTTCGCCGCG
ATCGTCGAGC TTGCCTGCCG CTACGACAAG CCGGTGCGCA TCGGCGTGAA CTGGGGCAGC
CTCGACCAGT CGGTCCTTGC CCGCATCATG GACGCCAACG CCAAGCGTGC CGAGCCGCGC
GACGCCGGCG CGGTGATGCG CGAGGCGCTC GTCGTCTCGG CGCTCGAATC CGCGGCCAAG
GCCGAGGAAT ACGGCCTCGG CCGCGAGCGC ATCATCCTGT CGGCCAAGGT TTCCAGCGTG
CAGGACCTGA TCGCGGTGTA CCGCGATCTC GCCCGGCGCA GCGACTACGC GCTGCATCTG
GGCCTCACCG AGGCCGGCAT GGGCAGCAAG GGCATCGTCG GCTCCACCGC CGCGCTCGCC
GTGCTGCTGC AGGAAGGCAT CGGCGACACC ATCCGCATCT CGCTCACCCC CGAGCCGGGC
GGCAGCCGCA CCCAGGAGGT CGTGGTCGCG CAGGAGATCC TGCAGACCAT GGGCCTGCGC
GCCTTCACCC CCATGGTGAC TGCCTGCCCG GGCTGCGGCC GCACCACCAG CACCTTCTTC
CAGGAGCTCG CCTCCGGTAT CCAGGACTAC GTGCGCGCGC AGATGCCGGT GTGGCGCGAA
CAGTACGACG GCGTCGAGAA CATGACGCTG GCAGTGATGG GCTGCGTGGT CAACGGCCCG
GGCGAGAGCA AGCACGCCAA CATCGGCATC TCGCTGCCGG GCACCGGCGA AACCCCGGCG
GCGCCGGTGT TTGTCGACGG CGAGAAGGTC GTCACCCTGC GCGGCGACAA CATCGCTGCA
GAGTTCAAGG CGCTCGTCGA CGATTACGTC GCCACCCGCT ACGTGAAGAA GGGCGCCTGA
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| Protein sequence | MNPRHELQPI EARPLARHRT HQVRVGKVRI GGEAPVVVQS MTNTDTADVL ATAMQVAELA
RAGSEIVRIT VNNEAAAAAV PKIRDRLLAL NMDVPLVGDF HYNGHKLLTD FPACAEALAK
LRINPGNVGA GRKRDPQFAA IVELACRYDK PVRIGVNWGS LDQSVLARIM DANAKRAEPR
DAGAVMREAL VVSALESAAK AEEYGLGRER IILSAKVSSV QDLIAVYRDL ARRSDYALHL
GLTEAGMGSK GIVGSTAALA VLLQEGIGDT IRISLTPEPG GSRTQEVVVA QEILQTMGLR
AFTPMVTACP GCGRTTSTFF QELASGIQDY VRAQMPVWRE QYDGVENMTL AVMGCVVNGP
GESKHANIGI SLPGTGETPA APVFVDGEKV VTLRGDNIAA EFKALVDDYV ATRYVKKGA
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