| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3385 |
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| Symbol | hfq |
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| ID | 7873876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 3704241 |
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| End bp | 3704477 |
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| Gene Length | 237 bp |
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| Protein Length | 78 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643700324 |
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| Product | RNA-binding protein Hfq |
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| Protein accession | YP_002890356 |
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| Protein GI | 237654042 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAACA AAGGGCAACT CCTCCAGGAC CCCTTCCTGA ACACCCTTCG TCGCGAACAC
ATTCCCGTGT CGATCTACCT GGTCAACGGC ATCAAGCTGC AGGGCCAGAT CGAGTCCTTC
GACCAATACG TCGTGCTGCT CAAGAACACC GTCACCCAGA TGGTCTACAA GCACGCGATC
TCCACCGTCG TGCCCGCCCG CCCGGTCGTC ATCCAGCAGG AAGAGGGTGC CAACTGA
|
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| Protein sequence | MSNKGQLLQD PFLNTLRREH IPVSIYLVNG IKLQGQIESF DQYVVLLKNT VTQMVYKHAI
STVVPARPVV IQQEEGAN
|
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