Gene Tmz1t_3365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3365 
Symbol 
ID7873856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3675179 
End bp3677164 
Gene Length1986 bp 
Protein Length661 aa 
Translation table11 
GC content66% 
IMG OID643700302 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_002890336 
Protein GI237654022 
COG category[I] Lipid transport and metabolism 
COG ID[COG1022] Long-chain acyl-CoA synthetases (AMP-forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.865924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACACAC GCACGAGCGC GTCCGAGCCC GGACAGGGCG GAGCAGGGCC GGATACCTTT 
CCGCGCTGGC TGATGCACCA CGCCAAGGCG CGCCCCCAGC AGCCGGCGAT GCGCGAGAAG
GAATACGGCA TCTGGCAGAC CTATACCTGG GCGCAAGTGG CCGAGAACGT GCGCGCGATC
GCCTGCGGGC TGGCGCAGCT CGGCTTCAAG CGCGGCGACC GCCTCGCGGT GGTGGGCGAC
AACCGCCCGC GGTTGTACTG GTCGGTGGCG GCCTGCCAGT GCCTGGGCGG CATCCCGGTG
ATGATGTACC AGGACGCGGT GGCCCAGGAG ATGGCCTACG TGCTGCAGGA CGCCGAGATC
AAGTTCGCCG TGGTCGAGGA CCAGGAGCAG GTGGACAAGA TGGTCGAGAT CCAGCCCGAT
GCGCCGCTGC TCGCGCATGT GATCTACGAC GACCCCCGTG GCATGCGCCA TTACACCCAG
ACCCTGCTGA TGGGCCTGGA CGAGCTGCAG GAGATGGGGC GCATCCACGA CCGCAACCAG
CCTGATTTCC TCGACGGCGA GATCGACAAG GGCGCCTCCG ACGACATCTC GATCATGCTG
TACACCTCGG GCACCACCGG CAAGCCCAAG GGCGTGTGCC AGACCCATGG CGCGTTCATC
GCCGCGGCGC GCGGCGCGAT CCAGTTCGAC AAGCTCACCG ACAAGGAGGA CATCCTGTCC
TACCTGCCGA TGGCCTGGGT GGGCGACCAC CTGTTCTCGT TCGCGCAGGC CACGGTGGCG
GGCTTCACGA TCAACTGCCC GGAGTCGGGC GAGACGGTGA TGAACGATCT GCGCGAGATC
GGACCCACCT ATTACTTCGC CCCGCCGCGC GTGTTCGAGA ACCTGCTGAC CCAGGTGATG
ATCCGCATGG AAGACGCCGG CAGCCTCAAG CGCAAGATCT TCCATCACTT CATGGACGTG
GCGCGGCGCT GCGGCGCCGA CATCCTGGAT GGCAAGCCGG TGTCGGGTGG CGATCGCTTC
CAGTACTGGC TGGGCAACCT GCTGGTGTAT GGGCCGCTGA AGAACGTGCT CGGCATGAGC
CGCATCCGCG TGGCCTATAC GGCCGGCGCG GCGATCGGGC CCGACCTGTT CCGCTTCTAC
CGCTCGATCG GCATCAACCT CAAGCAGCTC TACGGCCAGA CCGAGACCTG CGCCTACGTG
TGCCTGCAGC CCGACGGCGA GATCAAGCTG GATTCGGTCG GCAAGCCGGC ACCCTTCGTC
GAGGTCAAGC TCGCCGACAA CGGCGAGATC CTGGTCAAGG GGCCGATGCT GCTCAAGGCC
TACTACAAGC GCCCCGACGC GACCGCCGAG TCGATCAACG CCGATGGCTA CTTCATGACC
GGCGACGCCG GCTTCTTCGA CGCCGACGGC CACCTGAAGA TCATCGACCG TGCCAAGGAC
GTCGGCAAGA TGGCCGACGG CACGATGTTC GCGCCCAACT ACATCGAGAA CAAGCTCAAG
TTCTTCCAGC ACATCAAGGA GGCGGTGACC TTCGGTGCCG GCAAGGAATT CGCTACCGCC
TTCATCAACA TCGACCTCGA GGCGGTGGGC AACTGGGCCG AGAAGAAGGG CATGGCCTAC
TCCGGCTACA CCGACCTCGC CCAGCAGGCT GCGGTGTACG AGCTGATCCG CGACTGCGTC
GAGAAGGTCA ACGCCGACCT CGCCGCCGAC CCCAACATGA GCGGCTCGCA GATCAAGCGC
TTCCTGATCC TGCACAAGGA GCTCGACGCC GACGACGGCG AGCTCACGCG CACGCGCAAG
GTACGGCGCA ATTTCATCGC CGAGAAGTAC GGCGTGCTGA TCGAGGCGAT GTTCGAAGGC
CGCAAGACCC AGTTCATCGA GACCCAGGTC AAGTACGAGG ACGGCCGCAC CGGCAAGGTC
TCGGCCGACC TGCGCATCGA GGAGGTGAAG ACCTTCGCGC CGCAGGCCGG CAAGCGCGCG
GCCTGA
 
Protein sequence
MDTRTSASEP GQGGAGPDTF PRWLMHHAKA RPQQPAMREK EYGIWQTYTW AQVAENVRAI 
ACGLAQLGFK RGDRLAVVGD NRPRLYWSVA ACQCLGGIPV MMYQDAVAQE MAYVLQDAEI
KFAVVEDQEQ VDKMVEIQPD APLLAHVIYD DPRGMRHYTQ TLLMGLDELQ EMGRIHDRNQ
PDFLDGEIDK GASDDISIML YTSGTTGKPK GVCQTHGAFI AAARGAIQFD KLTDKEDILS
YLPMAWVGDH LFSFAQATVA GFTINCPESG ETVMNDLREI GPTYYFAPPR VFENLLTQVM
IRMEDAGSLK RKIFHHFMDV ARRCGADILD GKPVSGGDRF QYWLGNLLVY GPLKNVLGMS
RIRVAYTAGA AIGPDLFRFY RSIGINLKQL YGQTETCAYV CLQPDGEIKL DSVGKPAPFV
EVKLADNGEI LVKGPMLLKA YYKRPDATAE SINADGYFMT GDAGFFDADG HLKIIDRAKD
VGKMADGTMF APNYIENKLK FFQHIKEAVT FGAGKEFATA FINIDLEAVG NWAEKKGMAY
SGYTDLAQQA AVYELIRDCV EKVNADLAAD PNMSGSQIKR FLILHKELDA DDGELTRTRK
VRRNFIAEKY GVLIEAMFEG RKTQFIETQV KYEDGRTGKV SADLRIEEVK TFAPQAGKRA
A