| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3359 |
|---|
| Symbol | |
|---|
| ID | 7873851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 3668759 |
|---|
| End bp | 3669994 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643700297 |
|---|
| Product | phenylacetate--CoA ligase |
|---|
| Protein accession | YP_002890331 |
|---|
| Protein GI | 237654017 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1541] Coenzyme F390 synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTCC ACGACACGCG CGAGACCCGC GATCCCGAGG CGCGCGAGCG CGAGCTGCTG
AGCCGCCTGC CGGCGCAGAT CGCCCATGCG CGCGCCGCCG CGCCCGCCTT CGGCCGCCTG
CTGGCCGACG TCGACCCGGA TTCGGTCACC AGTCGCGAGG CGCTCGCCAC GCTGCCGGTC
ACACGCAAGT CGGAACTGCT CGAGCTGCAG AAGGCGGCGC GCCCCTTCGG CGGCTTTTCG
GCGGTGGGCT GGGGTGCGGC GTGCAGGCGG GTGTTCGCCT CGCCCGGCCC GCTCTACGAA
CCCGAAGGCG CACGGCCCGA CTACTACCGC CTGGCGCGCG CGCTGTTCGC CGCGGGCTTC
CGTGCCGGCG ACCTGGTGCA CAACACCTTC TCGTACCACT TCACGCCCGC CGGCTCGATG
ATGGAGACGG CCGCGCACGC GCTCGGCTGC ACCGTCTTTC CCGCCGGCGT CGGCCAGACC
GAGCAGCAGC TCGCGGCGAT CGCCGACCTG CAGCCCAACG CCTACGTGGG CACGCCGTCC
TTCCTGCGCA TCCTGCTCGA CAAGGCGGAC GAGCTCGGCG TGCGGGTGTC GTTCACCAAG
GCCTTCGTCT CCGGCGAGGC CTTTCCGCCC AGCATGCGCG ACGCCCTTGC CGCGCGCGGC
ATCATGGCCT TCCAGGCGTA TGCCACTGCA GACATCGGCC TGATCGCCTA TGAGACGCCG
GCGCGCGAGG GCATGGTGGT GGACGAGGAT GTGCTGCTCG AGATCGTCCG CCCCGGCACC
GGGGACCCGG TGGCCGTGGG CGAGGTGGGC GAGGTGGTGG TGACCACCCT CAACCCCGAT
TACCCGCTGA TCCGCTTCGG CACCGGCGAC CTCTCCGCGG TGCTGCCCGG GGACTCGCCC
TGCGGGCGCA CCAACGTGCG CATCAAGGGC TGGATGGGGC GCGCCGACCA GACCACCAAG
GTCAAGGGCA TGTTCGTGCA TCCGGGGCAG ATCGCGCAGG TTGTGCGACG GCACCCCGAG
ATCACGCGCG CGCGCTTGGT GGTAGATAAT CCCGACCTCG CCGACCGCAT GACGCTGATG
TGCGAGGCGG CAGGTGGCGG CAGCGAGGCC CTCGCCGCTG CCGTAGCCGC CAGCATCCGC
GAGCTGACCA AGCTGCGCGG CGAGGTCGCC TTCCTGCCCG CGGGCGCGCT CGCCAACGAC
GGCAAGGTCA TCGACGACGT GCGCACCTAC GAATAG
|
|---|
| Protein sequence | MNFHDTRETR DPEARERELL SRLPAQIAHA RAAAPAFGRL LADVDPDSVT SREALATLPV
TRKSELLELQ KAARPFGGFS AVGWGAACRR VFASPGPLYE PEGARPDYYR LARALFAAGF
RAGDLVHNTF SYHFTPAGSM METAAHALGC TVFPAGVGQT EQQLAAIADL QPNAYVGTPS
FLRILLDKAD ELGVRVSFTK AFVSGEAFPP SMRDALAARG IMAFQAYATA DIGLIAYETP
AREGMVVDED VLLEIVRPGT GDPVAVGEVG EVVVTTLNPD YPLIRFGTGD LSAVLPGDSP
CGRTNVRIKG WMGRADQTTK VKGMFVHPGQ IAQVVRRHPE ITRARLVVDN PDLADRMTLM
CEAAGGGSEA LAAAVAASIR ELTKLRGEVA FLPAGALAND GKVIDDVRTY E
|
|---|
| |