Gene Tmz1t_3337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3337 
SymbolrplD 
ID7874235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand- 
Start bp3642318 
End bp3642938 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content63% 
IMG OID643700271 
Product50S ribosomal protein L4 
Protein accessionYP_002890309 
Protein GI237653995 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000000330441 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTGA AACTCTTGAA TGATCAGGGT CAGGCTGCGT CGACGCTCGA AGCGTCGGAC 
GTGCTGTTCG GCCGTGACTA CAACGAAGCC CTGGTGCACC AGGTCGTGAC CGCCTACCTT 
GCGAACGCCC GTTCCGGCAA CCGCAAGCAG AAGGGTCGCT CCGAGATCGC CAAGTCGACC 
CGCAAGCCGT TCCGTCAGAA GGGCACGGGC AACGCCCGTG CAGGCATGGC GTCGAGCCCG 
CTGTGGCGTG GTGGCGGCAA GATCTTCCCG AGCTCTCCCG ACGAGAACTT CAGCCAGAAG 
GTCAACCGCA AGATGTACCG CGCCGGTGTG GCCGCGATCC TGTCGCAGCT CGCTCGCGAG 
GACCGTCTTG CGGTGGTCGA GAACTTCAGC GTCGAAGCGC CGAAGACCCG CCTGCTGTCG 
CAGAAGCTCA AGGGGATGGG CCTGGATTCG GTCCTGGTCA TCACCGACGA AATCGACGAG 
AACCTGTTCC TGTCCTCGCG CAACCTTCAC CAGGTCCTGG TGCTGGAAGT GAGCGAGGCG 
GATCCGGTGT CGCTCGTGCG TTTCCCCAAG GTGCTGGTCA CCAAGGGCGC GCTGGCGAAG 
ATGGAGGAAG CGTGGCAATG A
 
Protein sequence
MELKLLNDQG QAASTLEASD VLFGRDYNEA LVHQVVTAYL ANARSGNRKQ KGRSEIAKST 
RKPFRQKGTG NARAGMASSP LWRGGGKIFP SSPDENFSQK VNRKMYRAGV AAILSQLARE 
DRLAVVENFS VEAPKTRLLS QKLKGMGLDS VLVITDEIDE NLFLSSRNLH QVLVLEVSEA 
DPVSLVRFPK VLVTKGALAK MEEAWQ