| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3331 |
|---|
| Symbol | rplP |
|---|
| ID | 7874229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 3639361 |
|---|
| End bp | 3639777 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643700265 |
|---|
| Product | 50S ribosomal protein L16 |
|---|
| Protein accession | YP_002890303 |
|---|
| Protein GI | 237653989 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0197] Ribosomal protein L16/L10E |
|---|
| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000490254 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCAGC CGACTAGAAG GAAGTATCGG AAGGAGCAGA AGGGCCGCAA CACCGGCGTC
GCCACGCGCG GCGCCAAGGT GTCGTTCGGC GAGTATGGTC TGAAGGCCAT CGGTCGCGGT
CGGCTGACTG CCCGCCAGAT CGAGTCCGCC CGTCGTGCGA TGACCCGTCA TATCAAGCGT
GGCGGCCGCA TCTGGATCCG GATTTTCCCG GACAAGCCGA TTTCGAAGAA GCCGGCCGAG
GTCCGCATGG GTAACGGCAA GGGCAACCCG GAATATTGGG TTGCCGAGAT CCAGCCGGGC
AAGGTGCTGT ACGAGATGGA CGGGGTTGAC GAGGCCCTGG CGCGCGAGGC GTTTCGCCTT
GCGGCTGCCA AGCTGCCGAT CGAGACCGTG TTCGTCACCC GACTGATTGG GGGTTGA
|
|---|
| Protein sequence | MLQPTRRKYR KEQKGRNTGV ATRGAKVSFG EYGLKAIGRG RLTARQIESA RRAMTRHIKR
GGRIWIRIFP DKPISKKPAE VRMGNGKGNP EYWVAEIQPG KVLYEMDGVD EALAREAFRL
AAAKLPIETV FVTRLIGG
|
|---|
| |