Gene Tmz1t_3321 details

Gene Information

• Locus tag: Tmz1t_3321
• Symbol: rpsE
• ID: 7874219
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: -
• Start bp: 3635327
• End bp: 3635851
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643700255
• Product: 30S ribosomal protein S5
• Protein accession: YP_002890293
• Protein GI: 237653979
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00131629
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCAAGC AGCAAACCAA ACGTGCGCAA GCCTCCGACG AGCGCGATGA CGGCCTGAAG 
GAAAAGATGG TCGCGATCAA TCGCGTGACC AAGGTCGTCA AGGGCGGTCG TATCCTCGGC 
TTCGCCGCGC TGACCGTGGT CGGTGACGGC GACGGTGCGA TCGGCATGGG CAAGGGCAAG 
TCCCGCGAAG TGCCGGTGGC GGTGCAGAAG GCGATGGATG AAGCGCGTCG CAAGATGCGC 
AAGGTCTCGC TCAAGAACGG CACCCTTCAG CATACCGTGA TGGGCAAGCA TGGCGCCGCT 
TCGGTGCTCA TGCAACCCGC TCCGGCCGGT ACCGGCATCA TCGCCGGCGG TCCGATGCGC 
GCCGTGTTCG AAGTCATGGG CGTTACCGAC GTGATCTGCA AGTGCATCGG TTCGGCCAAT 
CCGTACAACG TCGTCCGTGC CACGATCAAC GGCCTGATGG CGATCAACAC CCCGGCGGAA 
ATCGCTGCGA AACGCGGCAA GTCCGTCGAA GAGATCCTGG GGTAA 

 

Protein sequence

MAKQQTKRAQ ASDERDDGLK EKMVAINRVT KVVKGGRILG FAALTVVGDG DGAIGMGKGK 
SREVPVAVQK AMDEARRKMR KVSLKNGTLQ HTVMGKHGAA SVLMQPAPAG TGIIAGGPMR 
AVFEVMGVTD VICKCIGSAN PYNVVRATIN GLMAINTPAE IAAKRGKSVE EILG