| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3315 |
|---|
| Symbol | rpsM |
|---|
| ID | 7874213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 3632583 |
|---|
| End bp | 3632945 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643700249 |
|---|
| Product | 30S ribosomal protein S13 |
|---|
| Protein accession | YP_002890287 |
|---|
| Protein GI | 237653973 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0099] Ribosomal protein S13 |
|---|
| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGTA TTGCTGGGGT AAACATTCCC AATCACAAGC ATGCCGAGAT CGCGCTGACC
GCCATCTATG GGATCGGCCG TTCGCGTGCT CAGAAGATTT GCGACGCTGC CGGCATCGTT
CGCTCGGTGA AGATCAAGGA TCTCACCGAG TCCGACATGG AGAAGCTGCG TGATGAAGTC
GCGCGCTTCG TGGTCGAAGG CGACCTGCGT CGTGAAGTCA CGATGAACAT CAAGCGACTG
ATGGACCTGG GCTGCTACCG CGGCGTCCGT CACCGTCGTG GCCTGCCGCT TCGCGGTCAG
CGCACCCGCA CCAATGCCCG TACCCGCAAG GGTCCGCGCA AGCCGATCGC CGGCAAGAAG
TAA
|
|---|
| Protein sequence | MARIAGVNIP NHKHAEIALT AIYGIGRSRA QKICDAAGIV RSVKIKDLTE SDMEKLRDEV
ARFVVEGDLR REVTMNIKRL MDLGCYRGVR HRRGLPLRGQ RTRTNARTRK GPRKPIAGKK
|
|---|
| |