Gene Tmz1t_3289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3289 
Symbol 
ID7874187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3605315 
End bp3606910 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content72% 
IMG OID643700223 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_002890261 
Protein GI237653947 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.290961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGGCCC GCGACCCGAT TGAAGCGGCC GCCTTCGCGG TCGATGCGGC CGACCGCGCG 
CGCCGGCGTG CGCTGCGTTA CCTCAACGTC TTCCGGCTGA TCCTGGGCGG TCTCTTCCTC
GTCGCCGGCG AGGCGCTCGG CCTCGGCAGC GAGAGCCCGC GCCTCTACCT CGTGGCGGTG
GTCGGCTACC TCGCCGCGGT GCTCAGTCTC GGTTTCCCCG ACGCGGTGCG ACGGCTCGGC
TTCGAACGCG TCGTGACCCT GCTCGCGCTC GCCGACATCG TCGCGCTCGC GGCGATCATG
TGGGTGAGCG GCGGCTACCG TAGCGGCATG CCGGTGCTGA TGATGGTGAT GCTCGCCGGT
GCAGGCCTGA TCGGCGAAGG GCGCATGGTG ATGTTCTCGG CCGCGCTCGC CACCCTGGCA
GTGCTGGTCG AGAACGCCTC GCGGCTTTTC GGTGGGGGGC AGTCGGTCGA GTTCCTGCAG
GTCGGCATCT TTTGCGCCGG CTTTTTCGGC ATCGCGGCGA TCGCGCGCCT GCTCGCGCTG
CGCGCCCAGG CCAACGCCGC GCTAGCGGCC GAGCGCGGCG TGGCGCTCGC CAAGCAGCAG
GCGGTGAGCG CCCACATCCT GCGCGACATG CAGGACGGCG TGATCGTGGT CGGCGCGCGC
GGCCGCGTCC TCCACGCCAA CGCGCAGGCG CTCGAGATGC TCGGCCTGAC CCGTGCCGGC
GACGGGGCGC TCGACGGACT CGCGCTCGCC GATCTCGACG CCGGGCTGGA GGACATGCTG
CAGCCGGCGG TGGGCGAGGA CGGGCGTCTG ATGCGGGTGG GTGCGGCCGG CCGCCTGCTG
CGCTGCCGCC GCGTGCAGGG CGACCGGGGG AGCGCGGCCG AGGGCGACAC CCTGCTGTAT
CTAACCGACT ACGAGGAGAT CCAGCGCCAG CTGCAGCAGA TCAAGCTCGC CGCGCTCGGC
CGCCTCACCG CAAGCATGGC GCACGAGATC CGCAACCCGC TGTCGGCGGT GACCCAGGCC
GCCGAGCTGC TCGGCGAGGA AAAACGCGCC GACATGCAGG CGCGCCTGGT GCGCATCATC
AACGATAATG CGCGCCGCAT CGAGCGCATG ATCCGCGACG TGCTCGCCCT CGGCCGGCGC
GAGCAGACCA TGCCCGAGGC CCTGCGCCTG GCCGCCTTCG TGCGCGAGAT CCTCGATGCG
CGCGTGTTCC GCGAGCCCGC CGAGGCGCAG CTGTACGAGC TTGCGATCGA CCCTGCGCTG
ACCCTGGCGA TGGACCGCGC CCACCTGCAC CAGATCCTCG ACAACCTGCT GTCGAACGCG
GCCCGCCATG CCTCGGGCGC GCCCGGCGCG GTGCGCCTGT GGGCGGAGGC CCTGCCGCAC
GCCAAGGTCG TGCTGCACGT GCAGGACGAC GGTCCGGGCT TCGACGAGGC GATGCGGGCG
CACCTGTTCG AACCTTTCTT CACCACCCAT CCCAAGGGTA CCGGCCTCGG ACTGTACATC
GCGCGCGAGC TGGCCGAGGC CAACGACGCC ACCCTGGCGC TCGCCCCGAG TACCCCCGGT
GCCGACTTCA TCCTCACCGC GAGCCAGCAG CCATGA
 
Protein sequence
MPARDPIEAA AFAVDAADRA RRRALRYLNV FRLILGGLFL VAGEALGLGS ESPRLYLVAV 
VGYLAAVLSL GFPDAVRRLG FERVVTLLAL ADIVALAAIM WVSGGYRSGM PVLMMVMLAG
AGLIGEGRMV MFSAALATLA VLVENASRLF GGGQSVEFLQ VGIFCAGFFG IAAIARLLAL
RAQANAALAA ERGVALAKQQ AVSAHILRDM QDGVIVVGAR GRVLHANAQA LEMLGLTRAG
DGALDGLALA DLDAGLEDML QPAVGEDGRL MRVGAAGRLL RCRRVQGDRG SAAEGDTLLY
LTDYEEIQRQ LQQIKLAALG RLTASMAHEI RNPLSAVTQA AELLGEEKRA DMQARLVRII
NDNARRIERM IRDVLALGRR EQTMPEALRL AAFVREILDA RVFREPAEAQ LYELAIDPAL
TLAMDRAHLH QILDNLLSNA ARHASGAPGA VRLWAEALPH AKVVLHVQDD GPGFDEAMRA
HLFEPFFTTH PKGTGLGLYI ARELAEANDA TLALAPSTPG ADFILTASQQ P