Gene Tmz1t_3238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3238 
Symbol 
ID7874459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand+ 
Start bp3539662 
End bp3540303 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content69% 
IMG OID643700172 
Productendonuclease III 
Protein accessionYP_002890210 
Protein GI237653896 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.27706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCGA TGAAGCGCGA GGCGATCCGC GAGTTTTTCC GCCGCCTGCA CGAGGCCGAA 
CCGCACCCGC AGACCGAACT CGAGTACGCG TCGCCCTATC AGTTGCTGGT CGCGGTGGTG 
CTGTCCGCCC AGGCCACCGA TCGCAGCGTC AATCTGGCCA CGCGCAAGCT GTTCGCGCTC 
GCCCCCACGC CCGAGGCCAT GGTCTCGCTC GGCGAGGAAG GCATCGCCGA GTGCATCAAG 
AGCATCGGCC TGTTCCGCAA CAAGGCGAAG AACACCCTCG CGCTGTCGCG CCTGCTGCTC 
GAACGCCACG GCGGCGAGGT GCCGGCGGTG CGCGAGGCGC TCGAAGCCCT GCCCGGCGTC 
GGCCGCAAGA CCGCCAACGT GGTGCTCAAC ACCGTCTTCC GCCAGCCGGC GATGGCGGTC 
GACACCCACA TCTTCCGCCT CGCCAACCGC ACCGGGCTGG CCCCGGGCAA GGATGTGCTG 
GAGGTCGAGA AGGCGCTGCT GCGGCGCGTG CCGAAGGACT ACCTGCTCGA CGCCCACCAC 
TGGCTGATCC TGCATGGCCG CTACGTGTGC ACCGCGCGCA AGCCCAAGTG CGGCGAGTGC 
GGCGTGCGCG ACCTGTGCCT GTGCCGCGAC AAGACCGACT GA
 
Protein sequence
MAAMKREAIR EFFRRLHEAE PHPQTELEYA SPYQLLVAVV LSAQATDRSV NLATRKLFAL 
APTPEAMVSL GEEGIAECIK SIGLFRNKAK NTLALSRLLL ERHGGEVPAV REALEALPGV 
GRKTANVVLN TVFRQPAMAV DTHIFRLANR TGLAPGKDVL EVEKALLRRV PKDYLLDAHH 
WLILHGRYVC TARKPKCGEC GVRDLCLCRD KTD