| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3230 |
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| Symbol | |
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| ID | 7874451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 3531654 |
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| End bp | 3533582 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643700164 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_002890202 |
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| Protein GI | 237653888 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.7142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCAAC CGATCGACAT GAAGCGATAT GCGCAGCTCA AGGCGGCGGG AGACCTGCCT
TCGCCGCGCG GCGTGGCGCT CGCGATCATC CGGCTCACGC AGGCGCCCGA CGTCTCGCTG
GCCGAGCTCG GCCGCGTGAT CAAGGGCGAT CCCGCCTTCG TCGGGCGCCT GATCAAGGCG
GCCAATGGCC TCATCGCGGA GAACCGGCGC GCGATCGTGT CGGTGCAGGA AGCGCTGATG
GTGCTCGGCC TGCCCGCCGT GCGCACGCTG GCGCTGGGCT TCTCGCTGCT GTCGACCTAC
CGCAAGGGTA CCTGCCAGGG CTTCGACTAC CCGCGTTTCT GGTCCTCCGC GCTGCTGATG
GCGATCTCGA TGCAGGCGCT CACCCAGCGC GTGCGGGTGG TCGCACCCGA CGAGGCGTTC
AGCCTCGGCC TGCTCGCGCG CGTGGGCGAG CTCTCGCTCG CGACCCTCTA TCCCGAGGCC
TTCTCCCGCC TGCTCGCGGA ACTCAAGCGC GATCCCGCCC TGCAGCAGGT GGTGCTCGAG
GACCAGGCCT TCGCGATGAA CCACCGCGAG CTCGGTGCCG CCATGCTTGC CGACTGGGGG
GTGCCGGACG CGCTGGTGCA ACCGGTGCGC TTCCACGAAC AGCCCGAGCT GGCCGGCTAC
GCGGAGGATT CGCGCGAGGC CGGGATCGTG CAGTGCCTCG TGCTGGCGCG CGCGGTGGCG
CAGCTGTGCC TCGCGCCCGA TTCCGAACAC GTGCGTCTGA TGGCGCCGAT GCTGCGCCTG
GCGGGCCGCC TCGGCCTCGG GCGCGGCGAG TTCGTCTCGC TGTGCGAGCG CGTCGGGCGC
GACTGGGCGG AGTGGGGCAA GCTGCTGCAG ATCCGCACCG AGGACGCGCC CCGCTTCGCC
GAGGTGGGCA GCGCGGCGGT GGATGCGGTT GGCGAGGCGC CCAAGGTGGC CGCCGAGGCC
GCTGGTCCGC AGCCGATGCG TGCGTTGGTC GTGGCCGGCG CGCGCGAGGA CCGCGAGCTG
CTGCGCGGCG AGCTCGAAGC CGCGGGGATC GTCCCGTTCA CCGCTGCGGG CGCGGACGCC
GCGCTCGAGG CCGCGCTCGA CGTCCAGCCG CAACTGCTGG TCGCGGACTG GTCGGAGGAG
GGGGAACGGG TGGTGCGCGG CCTGCGCGAC ATGCGCCTCG GACGCGGCGT GTACGTGATC
TGCATGCTCG GCAGCGACGA CGAGGCGCGC CTGCTGGCCG CCTCCGGCGC CGGGGTTGAC
GACTTCCTCG TCCGTCCGCT GCGACGTGCG GCGCTGACCG TGCGCCTGCG TGCCTGCGTG
CGCACATTGG TGTTGCAGCA GGAACTCGAG CACGAGCGCG AGGAACTGCG CAATTTCGCC
GCCGAGCTGT CGATCTCGAA CCGCCGCCTG CAGGAGGCCG CGCTGACCGA CCCGCTCACC
GGTCTGCCCA ACCGCCGTCG GGCGATCGAG GCGATGGAGG CCGAGTGGGC CACGGCGACG
CGTCACGGTC GCGCCTTCTC GGTCATGATC GTCGACCTCG ACGGCTTCAA GACCATCAAC
GACACCCATG GGCACGACGT CGGCGACATG GCCCTGCGCC AGGCCGCGGC GACCCTGCGT
GGCGCGCTGC GCGCCCAGGA CCTGATCTGC CGTACCGGTG GCGACGAGTT CCTGGTGCTA
TGCCCCGATA CCGACCTGAA GGCGGCGATG CTGGTCGCGG AGCGCCTGCG CGTGGCCGTG
CAGGCCAGTC CGGTCGAGAC CGGCGGCCCG CAGATCTTCC TCACTGCCAG CGTCGGCGTG
GCCATGCGCG TGCCCGCCAT GGGCAGCGTC GATGCACTGA TCAAGTGTGC CGACGACAGC
GTGTATCGTG CCAAGCAGCG TGGCCGCAAC TGCATCGCCG CACTCCAGCT CCAGTCCGGC
GCGGGCTGA
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| Protein sequence | MPQPIDMKRY AQLKAAGDLP SPRGVALAII RLTQAPDVSL AELGRVIKGD PAFVGRLIKA
ANGLIAENRR AIVSVQEALM VLGLPAVRTL ALGFSLLSTY RKGTCQGFDY PRFWSSALLM
AISMQALTQR VRVVAPDEAF SLGLLARVGE LSLATLYPEA FSRLLAELKR DPALQQVVLE
DQAFAMNHRE LGAAMLADWG VPDALVQPVR FHEQPELAGY AEDSREAGIV QCLVLARAVA
QLCLAPDSEH VRLMAPMLRL AGRLGLGRGE FVSLCERVGR DWAEWGKLLQ IRTEDAPRFA
EVGSAAVDAV GEAPKVAAEA AGPQPMRALV VAGAREDREL LRGELEAAGI VPFTAAGADA
ALEAALDVQP QLLVADWSEE GERVVRGLRD MRLGRGVYVI CMLGSDDEAR LLAASGAGVD
DFLVRPLRRA ALTVRLRACV RTLVLQQELE HEREELRNFA AELSISNRRL QEAALTDPLT
GLPNRRRAIE AMEAEWATAT RHGRAFSVMI VDLDGFKTIN DTHGHDVGDM ALRQAAATLR
GALRAQDLIC RTGGDEFLVL CPDTDLKAAM LVAERLRVAV QASPVETGGP QIFLTASVGV
AMRVPAMGSV DALIKCADDS VYRAKQRGRN CIAALQLQSG AG
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