Gene Tmz1t_3221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3221 
Symbol 
ID7874442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3523214 
End bp3525121 
Gene Length1908 bp 
Protein Length635 aa 
Translation table11 
GC content71% 
IMG OID643700155 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_002890193 
Protein GI237653879 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGATT TTGCCGGGAT GGAGGATCTG CTGCAGGACT TCCTCGTCGA AGCCGGCGAC 
CTGCTGTCCG ACGTCGACAA CAAGCTCGTC GAACTCGAGC ACAGCCCGGA TGACCCCGGC
CTGCTCAACG ACATCTTCCG TGGCTTCCAC ACCATCAAGG GCGGCGCGGG CTTCCTCGGC
GCGGCCGAGC TGGTGACCCT GTGCCACCTC ACCGAGAGCC TATTCGATCG CCTGCGCAAG
CACGAGCTCG AGGTCACCCC CGAGCGCATG GACGTGATCC TGTCGGCGAC CGGCGCGGTG
CGCGACATGT TTGTCGATCT GGGCCGCGGC AACCGTCCGG GGCCGGCTGC GCCCGACCTG
CTCGAGGCGC TGCGCGCCGC GTGCGCCGGG CGACCGGCGG CAGCCGCCGC GGGGGCACCC
GTCGCGCCCG CCGCCGAGGT GCGGCCCGCC GGGGTGGTCC TGCCGCGGCC GGGCGGGCCC
GACTGGGATG CCTTGTATGC TGCGGTCACC GGCGCGACCG CGCCGGCCGG AGCGCCCGTC
GCGGCGCCCG CGATCCCGCG GCCCGCGCCG CTTCCCGCGC TCGTGCCCGC CGCCGCCGCG
GCGGCTGCCG ACCCGGTGGT CGCCGCCGCC TTCGGCCGCC GCGCCAGCGA CGTGCCCGGT
GCCGGCGCGC CGGTCGGTCG GCGCGAGGGC GAGCGTCAGC GCGACAACTC GATCCGGGTG
GACACCGCCC GCCTCGATCA GGTGCTCAAC CTCTCGGGCG AGATCGGCCT CACCAAGAAC
CGGCTCAACG CGCTGCGCAG CGACATCCTT GCCGGCCGCA CCGACACCGA GACCCTGCAG
GCGCTCGACC TGGCGGTGAG CCAGCTCGAC CTGCTCGTCT CCGATCTGCA GAACGCGGTG
ATGAAGACGC GCATGCAGCC GATCGGCCGG CTCTTCCACA AGTACCCGCG CATCGCCCGC
GATCTCGCGC GCAACCTCGG CAAGGAGGTC GAGCTGGCGT TGGTCGGTGA GGACACCGAG
ATCGACAAGA CCATGGTCGA GGATCTCTCC GACCCGATCA TCCACCTCAT CCGCAACGCG
GTGGATCACG GCATCGAGGA TCCCGCCCGG CGCGCCGCCG CCGGCAAGCC GGCCAAGTCG
GTGCTGCGCC TGGAGGCGCG CCAGGAGGGC GACCACATCG TGATCACCGT GGCCGACGAC
GGCCGCGGCA TGGATCCCGA GAGGCTGCGC GCGAAGGCGC TCGCGCAAGG CGTGATCACC
GCCGAGGAGG CGAGCACGCT CGATGAGCGC CAGAGCTACG ACCTCATCTT CCTGCCCGGG
TTTTCCACCG CCGAGAAGGT GTCGGACGTG TCCGGCCGCG GCGTCGGCAT GGACGTGGTG
CGCACCAACA TCCAGAAACT CAACGGCAGC ATCGAGATCC AGTCCCAGCT CGGCAAGGGC
ACCACGCTGC TGATCCACCT GCCGCTGACC CTGGCGATCC TGCCGGTGCT GCTGGTGCGC
CTCGGCGATC AGCCCTTCGC CGTGCCGCTG TCGATGGTGC GCGAGATCCT GCCGATCGAG
CCGGGCGGCA TCCAGGACGT CGGTGGCAAG GCCACCATGG TGGTGCGCGG CGAGGTGCTG
CCGATCGTGC CGCTGTCCGC GCTGCTCGGC TGGCCGCGCG AGGCGGTGCC GCAGTATGGC
GTGGTGATGC AGTCGGGCGC CGCGGTGTTC ATTCTCGCGA TCGACAGCTT CGCCGGGCGC
GAGGACGCGG TGATCAAGTC GCTCGAGGTC TTCCGACCGA AGGGCGTGGC CGGGGTGACC
ACGCTCGCCA ACGGCCAGAT CGTGCTGATC CTCGACATGA AGGAGCTGCT CGAGTCGGCC
GGCGATCGGC GCAGCGTGTC GCGCTCGACG CTGTTCGAGG CGGCGTAG
 
Protein sequence
MSDFAGMEDL LQDFLVEAGD LLSDVDNKLV ELEHSPDDPG LLNDIFRGFH TIKGGAGFLG 
AAELVTLCHL TESLFDRLRK HELEVTPERM DVILSATGAV RDMFVDLGRG NRPGPAAPDL
LEALRAACAG RPAAAAAGAP VAPAAEVRPA GVVLPRPGGP DWDALYAAVT GATAPAGAPV
AAPAIPRPAP LPALVPAAAA AAADPVVAAA FGRRASDVPG AGAPVGRREG ERQRDNSIRV
DTARLDQVLN LSGEIGLTKN RLNALRSDIL AGRTDTETLQ ALDLAVSQLD LLVSDLQNAV
MKTRMQPIGR LFHKYPRIAR DLARNLGKEV ELALVGEDTE IDKTMVEDLS DPIIHLIRNA
VDHGIEDPAR RAAAGKPAKS VLRLEARQEG DHIVITVADD GRGMDPERLR AKALAQGVIT
AEEASTLDER QSYDLIFLPG FSTAEKVSDV SGRGVGMDVV RTNIQKLNGS IEIQSQLGKG
TTLLIHLPLT LAILPVLLVR LGDQPFAVPL SMVREILPIE PGGIQDVGGK ATMVVRGEVL
PIVPLSALLG WPREAVPQYG VVMQSGAAVF ILAIDSFAGR EDAVIKSLEV FRPKGVAGVT
TLANGQIVLI LDMKELLESA GDRRSVSRST LFEAA