Gene Tmz1t_3220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3220 
Symbol 
ID7874441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3521225 
End bp3523171 
Gene Length1947 bp 
Protein Length648 aa 
Translation table11 
GC content72% 
IMG OID643700154 
Producttransaldolase 
Protein accessionYP_002890192 
Protein GI237653878 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0564] Pseudouridylate synthases, 23S RNA-specific 
TIGRFAM ID[TIGR00876] transaldolase, mycobacterial type 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGAGA TCCTCTACCG CGACGACTGG CTGGTTGCGA TCCACAAGCC CTCCGGCCTG 
CTCGTGCACC GCAGCCCGAT TGCCGCGCAC GAGGAACGCT TCGCGGTGCA GCTGCTGCGC
GACCAGCTCG GCCGCCGCGT GTATCCCGCC CACCGGCTGG ATCGCGGCAC CTCGGGCGTG
CTGCTGTTCG CGCTCGATCG CGAGGTGGCG CGCACGCTCG CGCAGCGTTT CGAGGCGCAG
GCGGTCGACA AGCGCTACCT GGCGGTCGTG CGCGGGCATC CGCCCGAGCA CGGCGTGATC
GAGCACGCGC TGGTACGCCG ACTCGATGCG GTCGAAGTGC GCAGCGGCAA GGGCGCCGGG
GCCCGCGACG CGCTGCCCGA GGATGTCGAC GACAGTGATT CGCCAGAGGC TGCCGAGCCG
GTCGCCCAGC CCGCGCGCAC CCGCTTCCGC CGCCTCGCCA CGGTCGAGCT GCCGCACGCG
GTGGACCGCT ACCCCAGCAG CCGCTACGCG CTCGTCGAGC TCCTCCCCGA GACCGGCCGC
CGCCATCAGC TGCGCCGCCA CCTCAAGCAC ATCGCCCACC CGATCATCGG CGACGCCACC
TACGGCAAGG GCCGCCATAA CCGCCTGTTC CAGGCGCTCT TCGGCAGCCA CCGCCTGCTG
CTCGCGTGCA CGCGGCTGGC GCTGGCGCAT CCGGTGACGG AGCGCCCGCT GGAGATCGTG
GCGCCGGTGG CGGAGGATTT TGCCGCGGTG CTCGCGGCGC TCGGCTGGCA GACGGCACAG
CGCAGCACTT TCGAGGCAGA ATCCAGGCTT TCCGCCGCCC GCGGGCCCGC GCCCGAGCGG
CCCCGTTCCC ACGACACTCC AGGTAGAACG ATGAACCCGC TGCTCCAGGT ACGCCAGCAC
GGCCAGCAGA TCTGGCTTGA CAACCTCTCC CGCACCCTGC TCGAGGAAGG CCACCTCGCC
CGCTTCGTCG CCGACGACGG CGTCGCCGGC GTGACCACCA ACCCGGCGAT CTTCCACAAG
GCGATTTCCG GCGGGCGTTA TTACGAGGAC GATCTCGCCG CGCTCAAGCA GCAGCCGCTG
AGCGCCGAGG CGCGCTACGA GGCCCTGGTG ATCCCCGACG TGCAGCGCGC CTGCGACCTG
CTCGCACCCC TGCATCGGGA CAGCGGCGGC AGCGCCGGCT ACGTCAGCCT GGAAGTCTCG
CCCGCGCTCG CCCACGACGC CGACGGTACC GTGGCCGCCG GCCTGCGCCT GAAGGCCGCG
GTCGACCGCC CCAACCTGCT GATCAAGGTG CCCGCCACGC CGGCGGGCCT GGTCGCCATC
GAGCGCCTGA TCGGCGAGGG CGTCAGCGTC AACGTCACGC TGATGTTCTC GCTCGCGCAC
TGCGAGGGGG TGGCCGAGGC CTACCTGCGC GGGCTCGCGC GTCTGCGCGC GGCGGGCGGA
GACGTCGCGG GCGTGATGTC GGTGGCGAGC CTGTTCCTGT CGCGGGTCGA CACCCTGGTG
GACAAGCTGC TGGAAGAGCG CGGCGGCGAC CTGCCGGCGC TGCGCGGCCG CACCGCGGTG
GCGATGGCAC GGCTGGCCTA CGAGGCCTAC CAGGAGCGCT TCCACGGCGC CGGCTTCGAG
GACCTGGCCG CGGCGGGCGC ACGTCCGCAG TACATGTTGT GGGCAAGCAC CGGCACCAAG
AACCCGGCCT ACAGCGACCT GCTCTACGTC GAGCCGCTGA TCGGTGCCGA GACCATCAAC
ACCCTGCCCG ACGCCACGCT CGACGCCCTG CGCGACCACG GCCGCGTGGC CTCGACGCTG
GAACAGGATG TCGAGCAGGC CGCCGCCCAC TTCACCGCGC TCGCGGCCGC CGGCATCGAC
CTCGTGGCCG TGGGCGAGCG CCTGCAGCAG GAAGGCCTGG CGCAGTTCGA GCAGGCCTTC
GCAGGGCTGC TCGAACTCAC CGCCTGA
 
Protein sequence
MLEILYRDDW LVAIHKPSGL LVHRSPIAAH EERFAVQLLR DQLGRRVYPA HRLDRGTSGV 
LLFALDREVA RTLAQRFEAQ AVDKRYLAVV RGHPPEHGVI EHALVRRLDA VEVRSGKGAG
ARDALPEDVD DSDSPEAAEP VAQPARTRFR RLATVELPHA VDRYPSSRYA LVELLPETGR
RHQLRRHLKH IAHPIIGDAT YGKGRHNRLF QALFGSHRLL LACTRLALAH PVTERPLEIV
APVAEDFAAV LAALGWQTAQ RSTFEAESRL SAARGPAPER PRSHDTPGRT MNPLLQVRQH
GQQIWLDNLS RTLLEEGHLA RFVADDGVAG VTTNPAIFHK AISGGRYYED DLAALKQQPL
SAEARYEALV IPDVQRACDL LAPLHRDSGG SAGYVSLEVS PALAHDADGT VAAGLRLKAA
VDRPNLLIKV PATPAGLVAI ERLIGEGVSV NVTLMFSLAH CEGVAEAYLR GLARLRAAGG
DVAGVMSVAS LFLSRVDTLV DKLLEERGGD LPALRGRTAV AMARLAYEAY QERFHGAGFE
DLAAAGARPQ YMLWASTGTK NPAYSDLLYV EPLIGAETIN TLPDATLDAL RDHGRVASTL
EQDVEQAAAH FTALAAAGID LVAVGERLQQ EGLAQFEQAF AGLLELTA