| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3196 |
|---|
| Symbol | |
|---|
| ID | 7874336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 3481116 |
|---|
| End bp | 3482816 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643700125 |
|---|
| Product | dihydrolipoamide acetyltransferase |
|---|
| Protein accession | YP_002890168 |
|---|
| Protein GI | 237653854 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAC TCATTGAAGT GAAAGTACCC GACATCGGCG ATTTCGACGC GGTGCCGGTG
ATCGAGCTGT TCGTGAAGGT GGGCGACACC ATCAAGGTCG ACGACGCGAT CGCGACGCTC
GAATCCGACA AGGCCACCAT GGACGTGCCG TCCTCGGCCG CCGGCGTGGT CAAGGAAGTG
CTGGTCGCGA TCGGCGACAA GGTGTCCGAG GGCACGGTGC TGATCAAGCT CGAGGCGGCG
GGCGCCGCAG CGGCGGCCCC GGCGCCGGCT GCGGCCGCCG CACCCGCGTC CGCTGCAGCC
CCCGCTGCCG CACCTGCAGC GGCGCCCGCT CCGGCAGCCC CCGCGGCGGC CGGTGGCGGC
GTGGTCGAGG TGGTGGTGCC CGACATCGGC GACTTCGACG CCGTGCCCAT CATCGAGCTG
TTCGTGAAGG TGGGCGATAC CATCAAGGTG GACGACGCGA TCGCCACGCT CGAATCGGAC
AAGGCGACGA TGGACGTGCC GTCGTCGGCC GCCGGCGTGG TCAAGGAAGT GCTGGTCGCC
CTCGGCGACA AGGTCGGCCA GGGCAAGGTG CTGATCAAGG TCGAGACGGC CGCTGCGGGA
GCAGCGGCAG GCGCGAATGC AGCGCCTGCG CCCGCTCCGC TCGCGGCAAG CGCCGCTCCT
GCGGGCGCAC CCGGCGCCGC CCCGCTCGCC GACGGCGGCC CGAGCGCGAG CGCCCCGACC
TCGATGCCGG TCGCCTCGCC CGCCGCCCCG TCTGCGGTCA CGCTCGGTGG CAAGGTGCAT
GCCAGCCCCT CGGTACGCGC GTTTGCGCGC GAGCTCGGCG TCGATCTCGG CCAGGTCAAG
GCCACCGGTC CCAAGGGTCG TATCCTCAAG GAAGACGTCG CCGGCTTCAT AAAGGCGGCG
ATGACGAGCG GCGTGGTCCC GGGCAAGACC CCGGCCGCCG CCGCGGCGGG CGCGAGCCTG
GGTGGCGGGC TGGATCTGCT GCCGTGGCCC AAGGTCGACT TCGCCAAGTT CGGCGAGATC
GAGGTCAAGC CGCTCTCGCG CATCAAGAAG ATCTCCGGCC AGAACCTCGC CCGCAACTGG
GTGATGATCC CGGCGGTGAC CTACCACGAG GACGCCGACA TCACCGACCT GGAAGCCTTC
CGGGTGCAGA TGAACAAGGA GTACGAGAAG TCGGGCAAGA AGCTCACCAT GCTCGCCTTC
ATCATCAAGG CCTCGGTACG CGCGCTGCAG GAGTTCCCCG AGTTCAACAC CTCGCTCGAT
GGCGACAACC TGGTCTACAA GAAGTACTTC AACATCGCCT TCGCGGCCGA CACCCCCAAC
GGCCTGGTCG TGCCGGTGGT GAAGGATGCC GACAAGAAGA GCGTGTTCGA CATCGCCGCC
GAGACCGGCG CGCTCGCCAA GAAGGCGCGT GACGGCAAGC TCGGCCCGGC CGACATGTCG
GGCGCGTGCT TCACGATCAG CTCGCTCGGC GGCATCGGCG GTACCTACTT CGCACCCATC
GTCAATGCGC CCGAAGTGGC CATCCTCGGG GTGAACAAGT CGGTGATGAA GCCGGTGTGG
GACGGCAAGG CTTTCGTGCC GCGCCTGACG CTGCCGATGT CGCTGACCGC GGACCACCGC
GTCATCGACG GTGCGCTGGC CACCCGCTTC AACGTGTACC TCGCGCAACT GCTGGCGGAC
TTCCGCCGGG TGATGCTCTG A
|
|---|
| Protein sequence | MSQLIEVKVP DIGDFDAVPV IELFVKVGDT IKVDDAIATL ESDKATMDVP SSAAGVVKEV
LVAIGDKVSE GTVLIKLEAA GAAAAAPAPA AAAAPASAAA PAAAPAAAPA PAAPAAAGGG
VVEVVVPDIG DFDAVPIIEL FVKVGDTIKV DDAIATLESD KATMDVPSSA AGVVKEVLVA
LGDKVGQGKV LIKVETAAAG AAAGANAAPA PAPLAASAAP AGAPGAAPLA DGGPSASAPT
SMPVASPAAP SAVTLGGKVH ASPSVRAFAR ELGVDLGQVK ATGPKGRILK EDVAGFIKAA
MTSGVVPGKT PAAAAAGASL GGGLDLLPWP KVDFAKFGEI EVKPLSRIKK ISGQNLARNW
VMIPAVTYHE DADITDLEAF RVQMNKEYEK SGKKLTMLAF IIKASVRALQ EFPEFNTSLD
GDNLVYKKYF NIAFAADTPN GLVVPVVKDA DKKSVFDIAA ETGALAKKAR DGKLGPADMS
GACFTISSLG GIGGTYFAPI VNAPEVAILG VNKSVMKPVW DGKAFVPRLT LPMSLTADHR
VIDGALATRF NVYLAQLLAD FRRVML
|
|---|
| |