| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3193 |
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| Symbol | |
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| ID | 7874333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 3474084 |
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| End bp | 3476792 |
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| Gene Length | 2709 bp |
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| Protein Length | 902 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643700122 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002890165 |
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| Protein GI | 237653851 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0583373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCCT CCGCCGCCGC CCGGGCGACC CTGTCGCGCT GGTACTGGGC CATGCCCTAT
CTCGCGGTGA CCGTGCTCGC GCTGTCGATG CTCGCGGTCG TCTGGCTGCT GCAGGCGCGC
GAGACCGCGG TCGAGCGCGA CGCGCTCGCG CGCGACCTGC AGTGGACCGA GCAGTCGATC
CGGCGCGCCA TGCTCACCAC CGAGGAGTTT CTCGTCCAGC TCGCGCGCGA CCTGTCGGCG
GGCACGCTCG ACCACGACGA CTTCCAGCTG CGCGCCAACG AGCATCTGGC GATCAACCCC
GCGCTCGCCA ACCTCGCCTG GGTGGACCGC GAGCACGTGA TCGCCTGGTC GGCGCCCTTC
GACACCCGTG ACCTGCTCGC CGGCGAGATC CTCGTGGATG ACCAGGTGGA GGCCTTCCAG
AACAGCGCCC TGTCCGCCCG CCTGACCTAC GGCCGGCCCT ACATCGACGC GCGCGGCAGC
GCGGTGATCG AGGTGTACGC GCCCGTGCTG CGGCGCGGCG ATTCGCTCGG TGCGATCGTC
GCCGTGTATT CGATCGAGCG CATGCTGAGC CGGCTGGTGC CGGCGCGCTT TGCCGAAAAA
TACCGGCTTG CGGTGCTCGA CCGCGATGGC GGCGTGCTGA CCCTCAGCTC GGCCCTGCCG
CCCGCGCAGG AGGCGCTCTC GCTTACCCTC GCGCTCGATC CGCCGGGCAA CGGCCTCGCG
CTGCAGGCGA TGGCCTTCCG GCCCGGTGGG GCGGTGCTGC GCTACCTGCC GGCGGTGCTC
ATCGTGGGGC TGTCGCTGCT GGTGCTGTGG AGCCTGTGGA CGCTGCGCCG CCACGTGCAG
CGCCGGGTGC GGGTGGAGAA GGAGCGCGAC CAGCTCTTCG ACCTTTCGCT CGACCTCTTG
TGCGTCATCG ATCTCGATGG TCGTTTCGGG CGCTGCAACC CGGCCTTCGA GCGCGTGCTC
GGGCACGACC CCCGGAGCCT GCCCGGGTGC TCGCTGATCG ACTTCGTGCA TCCCGAGGAC
GTTTCCGAGA CGCTGGCGAT GTTGCGCCGC CTCGCCGGCG GCGAACCGGT GCGCTTCGAG
ACGCGCTGCC GCTGTGCCGA CGGCAGCTAC AAATGGCTGA TGTGGAGCAT CAACCCGGTA
CGCGAGGAGC GTCTGGTCTA CGCCGTGGCG CACGACGTCA CCGGACGCAA GGCCACCGAG
GACGCGCTGC GCGCCGAGTC CGCCTTCCGC AAGGCGATGG AGGACTCGGT CGTCACCGGC
CTGCGCGCGA TCGACCTGTC GGGACGCATC ATCTATGTGA ACACCGCCTT CTGCCGCATG
ATCGGCTTCG ACGAGGACGA GCTCGTCGGC GCCGGGCCGC CCTTTCCCTA TTGGCCACCC
GAGCAGCTCG CCGAATGCGA GCGCAACCTG TCGATGACCC TGTCGGGGCG CGCGCCGCGC
AGCGGCTTCG AGATGCGCAT CCTGCGCAAG AACGGCGAGC GCTTCGATGC GCGCTTCTAC
CTTTCCCCGC TGATCGACCT CACCGGCCGG CAGACCGGCT GGATGGCCTC GATCACCGAC
ATCACCGAGC CCAAGCGCGT GCGCGCCGCG CTCGAGTCGG CGCACGAGCG CTTCGAGGCG
GTGCTCGACG GCCTCGACGC CGCGGTGTTC GTGGCCGACG CGCGCACCGA CGAGATCCTC
TTCGCCAACC TCGCCTTCAA GCGCATCCAT GGTTTCGACG CGGTCGGGCG CACCGTGCGC
GGGGTGGCGG TGCCGCAGCC CGAGCGCGGC GACTACCGCG TCGATCCGCG CAACCTGTCG
CCCGCCGACG TGCCGCGCGA GCTCTTCGAC GGCGAATTGC TGCACCCGCA GTCGGGGCGC
TGGTACCACG TGCGCGAGCA GGCCACACGC TGGGTGGACG GGCGCGTGGT GCGCATGGGG
ATCGCCACCG ACATCACCGA CCGCAAGCAG ACCGCCGCGG TGGCGCGCGA GCAGGAGGAG
CGCCTGCAGC GCACTTCGCG CCTGATCACC ATGGGCGAGA TGGCCTCGAC GCTGGCGCAC
GAGCTCAACC AGCCGCTGGC GGCGATCGCG AACTACTGCG CCGGTTCGGT GACGCGGCTG
CAGTCGGGCA AGGCGAGGAC CGAGGACGTG CTCGCGGCGA TGCAGAAGGC GAGCTTCCAG
GCCGAGCGCG CCGGCAAGAT CATCCGCCGC GTGCGCGAGT TCGTGAAGAA GAGCGAGCCG
CAGCGCTGCG CGGTCGACCT CGTCGAGGTG CTGGAGGACG CGATCGGCTT CGCCGACATC
GACGCCCACC GCACCCGCAT CCGCATCCAC ACGGAGCTCG AGCCCGGGCT GCCGCCGGTG
TACGCCGACC GCATCATGAT CGAGCAGGTG CTGCTCAACC TGATCCGCAA CGGCCTCGAC
GCCATGGCCG ACGCCTTGCC CGAGGCGCGC GTGCTGACGG TGCGGGTGCG CACCGTCGGC
GCGGACGCGG TCGAGGTCGC GGTGATCGAC CGCGGCCACG GCATCAGCGA GGAGGGCAGG
GCGCAGCTGT TCACGCCCTT CTACACCACC AAGGCCGAGG GCATGGGCAT GGGGCTCAAC
ATCTGCCGCT CGATCGTCGA GTTCCACAAC GGCAGATTGC TGGTCGACGC CAACCCCGAA
GGCGGTACCA TATTCACGTT TACCCTGCCG ACGGAGTCCG CAATTGAGCG CAGTGCCCGC
AGCGCCTGA
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| Protein sequence | MQASAAARAT LSRWYWAMPY LAVTVLALSM LAVVWLLQAR ETAVERDALA RDLQWTEQSI
RRAMLTTEEF LVQLARDLSA GTLDHDDFQL RANEHLAINP ALANLAWVDR EHVIAWSAPF
DTRDLLAGEI LVDDQVEAFQ NSALSARLTY GRPYIDARGS AVIEVYAPVL RRGDSLGAIV
AVYSIERMLS RLVPARFAEK YRLAVLDRDG GVLTLSSALP PAQEALSLTL ALDPPGNGLA
LQAMAFRPGG AVLRYLPAVL IVGLSLLVLW SLWTLRRHVQ RRVRVEKERD QLFDLSLDLL
CVIDLDGRFG RCNPAFERVL GHDPRSLPGC SLIDFVHPED VSETLAMLRR LAGGEPVRFE
TRCRCADGSY KWLMWSINPV REERLVYAVA HDVTGRKATE DALRAESAFR KAMEDSVVTG
LRAIDLSGRI IYVNTAFCRM IGFDEDELVG AGPPFPYWPP EQLAECERNL SMTLSGRAPR
SGFEMRILRK NGERFDARFY LSPLIDLTGR QTGWMASITD ITEPKRVRAA LESAHERFEA
VLDGLDAAVF VADARTDEIL FANLAFKRIH GFDAVGRTVR GVAVPQPERG DYRVDPRNLS
PADVPRELFD GELLHPQSGR WYHVREQATR WVDGRVVRMG IATDITDRKQ TAAVAREQEE
RLQRTSRLIT MGEMASTLAH ELNQPLAAIA NYCAGSVTRL QSGKARTEDV LAAMQKASFQ
AERAGKIIRR VREFVKKSEP QRCAVDLVEV LEDAIGFADI DAHRTRIRIH TELEPGLPPV
YADRIMIEQV LLNLIRNGLD AMADALPEAR VLTVRVRTVG ADAVEVAVID RGHGISEEGR
AQLFTPFYTT KAEGMGMGLN ICRSIVEFHN GRLLVDANPE GGTIFTFTLP TESAIERSAR
SA
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