Gene Tmz1t_3189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3189 
Symbol 
ID7874329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand- 
Start bp3470093 
End bp3470584 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content70% 
IMG OID643700118 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_002890161 
Protein GI237653847 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.287296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAAA CCCAACCCGT CGTCGGCATC ATCATGGGCT CCAACTCCGA CTGGCCCACG 
ATGAAGGCGG CCGCGAAGAT GCTGGAAGAC TTCGGCGTGC CCTTCGAGGC CAAGGTCGTC 
TCCGCCCACC GCACCCCCGA CCTGATGTTC GAGTACGCCG AGGCCGCGCG CAGCCGCGGG 
CTCAAGGCGA TCATCGCGGG CGCCGGCGGT GCGGCCCACC TGCCGGGCAT GGTCGCGGCC 
AAGACCACGC TGCCGGTGCT CGGTGTGCCG GTGCAGTCGA AGGCGCTGTC GGGGCAGGAC 
TCGTTGCTCT CCATCGTGCA GATGCCCAAG GGCATCCCGG TCGCCACCTT CGCCATCGGC 
GAGGCGGGCG CGGCCAACGC GGGCCTCTTC GCGGTGGCGC TGCTCGCGGT CGAGGATGCC 
GTGCTGGCGC ACAAGCTCGC CGACTTCCGT GCCCGCCAGA CCCAGGCGGT GCTCGACATG 
ACCCTGGATT GA
 
Protein sequence
MNETQPVVGI IMGSNSDWPT MKAAAKMLED FGVPFEAKVV SAHRTPDLMF EYAEAARSRG 
LKAIIAGAGG AAHLPGMVAA KTTLPVLGVP VQSKALSGQD SLLSIVQMPK GIPVATFAIG 
EAGAANAGLF AVALLAVEDA VLAHKLADFR ARQTQAVLDM TLD