| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3178 |
|---|
| Symbol | |
|---|
| ID | 7874318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 3454273 |
|---|
| End bp | 3455283 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643700106 |
|---|
| Product | CiaB protein |
|---|
| Protein accession | YP_002890150 |
|---|
| Protein GI | 237653836 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAC TAACGACCTC TCAGCACCAG CGCCAGAACA TCCTCAACAA CCGCTATGCC
CTGCAAGCTG CGGAGCAGCA CTTGGGTTTG GGTGGCGTTG TGTTCAATGC AGAAACGCTC
TTCACCAAGC AACAGGTGAC GGCGCTGTTT GGCATTAGTG ACGCGACTGT GGAGCGGTAC
ATCTCCAGCC ATGGTGAGGA GCTGAAGGCC AATGGTTACC GCATTCTGAA GGGGAAAACT
CTCAGAGAAT TCAAGGTGTT GGTTGATGTT TCCCTCACTG ATGAGGGTAA CAAGGCGCCC
GTGTTGGGGG TGTTCAGCTT CCGTGCGGTG CTGAACCTGG CCATGCTGCT GACTGAGAGC
GACCGAGCCA AGGCCATCCG TAACCGGCTT CTTGACATCG TGATGGACGT CTTGGTCGAG
CGTACGGGGG GGCATACCAA GTTCATCAAT CAGCGTGACG ACCAGTACCT GACCGCAGCC
TTTCAGGAAC AGAGCTACCG GAAGCAGTTC ACTGACGCAC TTGACTTACA TGTGGTGGAA
AACAAGTGGA AGTACGCGCG CTTCAGCAAC TTAATCTATC AGAGCATATT CAAGGAAAAC
GCAACCGAGT ATCGAAAGGT CTTGAATCTT GCAGAAAAAG AAAGCATCCG CGAAACGATG
TACGCAGAAG TCCTCAATCT AATCGCAAGT TATGAGAATG GGTTTGCCCA TGAGCTTGCC
GAGGCTGCCA AAGGCAAGGG AGGAAAACTC ACTCTTCAGG AAGCTGAGGC CTTGTTTATC
CGTTTTCAGG GTCATCCGCT ATTCCAGCCT TTGATTCATG ATGCAAGGGC AAAGATGGCG
AGCCGTGACC TTGGATTCAG GGATGCCTTG CATCAAAAGC TGGAGGCCTA TATCCAGTCG
ATACCTGAGG CAGATTTCGA CCGCTTCCTG GGCGATACCA GCAAGTCGCT TGAAGAGCGA
CTCAGCGACC CAGCCACGCT TGCAGTCTTC AAGCGCTTGA AGGACCGCTG A
|
|---|
| Protein sequence | MSELTTSQHQ RQNILNNRYA LQAAEQHLGL GGVVFNAETL FTKQQVTALF GISDATVERY
ISSHGEELKA NGYRILKGKT LREFKVLVDV SLTDEGNKAP VLGVFSFRAV LNLAMLLTES
DRAKAIRNRL LDIVMDVLVE RTGGHTKFIN QRDDQYLTAA FQEQSYRKQF TDALDLHVVE
NKWKYARFSN LIYQSIFKEN ATEYRKVLNL AEKESIRETM YAEVLNLIAS YENGFAHELA
EAAKGKGGKL TLQEAEALFI RFQGHPLFQP LIHDARAKMA SRDLGFRDAL HQKLEAYIQS
IPEADFDRFL GDTSKSLEER LSDPATLAVF KRLKDR
|
|---|
| |