Gene Tmz1t_3173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3173 
Symbol 
ID7874314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3446529 
End bp3448019 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content65% 
IMG OID643700102 
ProductIntegrase catalytic region 
Protein accessionYP_002890146 
Protein GI237653832 
COG category[L] Replication, recombination and repair 
COG ID[COG4584] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTGC TGGGGAAGGT CAGAAGGCTG TACTACCGGG AGGGGCTCAC GCTCTCGGAG 
ATCGAGCGTC GCACGGGGCT GACGCGCAAG ACGATCCGCA AGTGGCTGAA GGCGCCCGAG
GGGGTTGAGC CGAAGTATCG ACGCAAGGTC GTCGACACCA AGATCGCGCC GTACGCGGCG
CAGTTGGTCA AGATGTTGGA GACCGATGCG CGGCGACCGC AACGGGACCG ACGCACGGCG
CTGAAGCTGT TTGGTCAGTT GCAGGTGCAG GGGTTCGACG GCGATTACAG CCGCGTCACC
GAGTTCATCC GGCGCTGGAG GGCCGAAGGC GGTGCCTCGG TCACGAAGGC CTTCGTTCCG
CTGCAGTTCG AGCCGGGAGA GGCGCACCAG TTCGACTGGA GCGAGGAGCA TCTGGTCATC
GGTGGGGTGT GGCGCAAGGT GCTCGTGGCG CACCTGAAGC TGTGCTACAG CCGTGCCTTT
GTCGTGCAGG CGTATCCGAC GCAGAGCCAC GAGATGCTGT TCGATGCGCA CGCGCGGGCG
TTTGCTGCGC TCGGGGGCGT GGCCCGGCGC GGGATCTACG ACAACATGAA GACGGCCGTC
GACCGGGTGA AGAAAGGCAA GGCGCGGGTG GTCAATACAC GCTTTGCGGC GATGGCCTCG
CACTACCTGT TCGAAGCGGA CTTCTGCAAT GTTGCCAGCG GTTGGGAGAA AGGCGTCGTC
GAGAAGAACG TGCAGGACAG CCGACGGCGG ATCTGGCAAG AGGCGGCCGA GACGCGCTTT
GGTTCCTTCA CCGAGCTGAA CCTGTGGTTG CTGGCGAAGT GTCGCAGCCT GTGGCAGGAG
CTCAAACATC CGGAGTACGA CCTCAGCCTG GCGGAGATGC TCGAGCAGGA GCAGCCCAGC
CTGATGCCGA TGATCACGCC CTTCGACGGC TACGTGGAGA CGCTGGGCAA GGTCTCGAGC
ACCTGCCTGG TTACGTTCGA GCGCTGCCGC TATTCAGCGC CGTGTGAGTT GGTGGGTCAG
ATGGTCGGCA TCCGGGTGTA TCCCGAGCAG ATCGAGCTCG TCGCGCACGA CACCGTCGTG
GCCCGTCACG TGCGCAGCTT CACGCGCAAC GAAGCGCGCT ACGACTGGCA GCACTATCTG
CCGCTGATCG AGCGCAAGCC CGGTGCGCTC AGGAACGGCG CACCCTTCGC CGACATGCCC
GCGCCACTGC AGACGCTGCG CGCACTGCTG CTCAAGCGCG AAGGCGGAGA TCGGGTCATG
GCGAAGGTGC TCGCCGCCGT GCCTCAGCAT GGCCTGGGGG CGGTCATCGT GGCGGTGGAG
TTGGCGCTCG AAGCGGGCCG CCCCAGCCCC GAGCACATCG AGAACGTGCT CAATCGCCTG
AAGTCGGCCC CTGCCACGCC GACCGTCGAC ACGGTACTGA CCCTGAGCGA AACACCGGTG
GCGGACCCGC AGCGTTACGA CCGGCTGCGT GCGGAGGTGA GCCATGCGTG A
 
Protein sequence
MNLLGKVRRL YYREGLTLSE IERRTGLTRK TIRKWLKAPE GVEPKYRRKV VDTKIAPYAA 
QLVKMLETDA RRPQRDRRTA LKLFGQLQVQ GFDGDYSRVT EFIRRWRAEG GASVTKAFVP
LQFEPGEAHQ FDWSEEHLVI GGVWRKVLVA HLKLCYSRAF VVQAYPTQSH EMLFDAHARA
FAALGGVARR GIYDNMKTAV DRVKKGKARV VNTRFAAMAS HYLFEADFCN VASGWEKGVV
EKNVQDSRRR IWQEAAETRF GSFTELNLWL LAKCRSLWQE LKHPEYDLSL AEMLEQEQPS
LMPMITPFDG YVETLGKVSS TCLVTFERCR YSAPCELVGQ MVGIRVYPEQ IELVAHDTVV
ARHVRSFTRN EARYDWQHYL PLIERKPGAL RNGAPFADMP APLQTLRALL LKREGGDRVM
AKVLAAVPQH GLGAVIVAVE LALEAGRPSP EHIENVLNRL KSAPATPTVD TVLTLSETPV
ADPQRYDRLR AEVSHA