| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3172 |
|---|
| Symbol | |
|---|
| ID | 7874313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 3445739 |
|---|
| End bp | 3446536 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643700101 |
|---|
| Product | IstB domain protein ATP-binding protein |
|---|
| Protein accession | YP_002890145 |
|---|
| Protein GI | 237653831 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1484] DNA replication protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGATG TGCTTGCCGA ACTGAAAGCC CTGCGCCTGT ACGGGATGGC CGACGCCTGG
GCGGAGCTGG TGTCCACGAG TGATCTCGGG TGTCAGAGTT CGGGTTGGCT GCTCGAGCAC
CTGCTCGAGG CCGAGCATAC CGACCGTCAC CTGCGCTCGA TCCGCTATCA ACTGCAGGCG
GCCCGCTTCC CGGTGCATCG GGATCTGGCC GGGTTCGACT TCGAGCAGTC GAAGGTGGAG
CGGGCGTTGA TTCAGGAACT CGCCACACTC GACTTCACCG CGCAGGCTCA CAACGTCGTC
TTCATCGGTG GCACCGGCAC AGGCAAGTCG CATTTGGCCA CGGCCCTGGG GGTGTCGGGG
ATCACCCAGC ACGGCAAGCG GGTGCGGTTT TACTCGACCG TTGATCTGGT CAATCTGCTC
GAGCAGGAGA AGGCGGCCGG CAAAGCCGGC AAGCTCGCCT TCTCGCTGCT GCGCATGGAC
CTGGTGATTC TCGATGAGCT GGGTTACCTG CCGTTCAGCC AGAGCGGCGG AGCGCTGCTG
TTCCATCTGC TCTCGAAGCT GTACGAGCAC ACCAGCGTGA TGATCACGAC CAACCTGAGC
TTCGGTGAAT GGGCCAGCGT GTTCGGCGAC GCAAAGATGA CCACGGCACT GCTCGACCGG
CTCACCCATC ACTGCCATAT CGTCGAGACC GGGAACGAGT CCTATCGCTT CCGTCAGAGC
TCGGCCAGCG CGCGGTCGCG GATCAAGGAC CGCGAGCAGC GCAAGCGCGG CCCCCTCACC
GAGGACGAGC CGTTCTGA
|
|---|
| Protein sequence | MRDVLAELKA LRLYGMADAW AELVSTSDLG CQSSGWLLEH LLEAEHTDRH LRSIRYQLQA
ARFPVHRDLA GFDFEQSKVE RALIQELATL DFTAQAHNVV FIGGTGTGKS HLATALGVSG
ITQHGKRVRF YSTVDLVNLL EQEKAAGKAG KLAFSLLRMD LVILDELGYL PFSQSGGALL
FHLLSKLYEH TSVMITTNLS FGEWASVFGD AKMTTALLDR LTHHCHIVET GNESYRFRQS
SASARSRIKD REQRKRGPLT EDEPF
|
|---|
| |